Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALYREFAly/REF export factor. (257 aa)    
Predicted Functional Partners:
THOC2
THO complex 2.
   
 0.999
THOC3
THO complex 3.
   
 0.998
THOC1
THO complex 1.
    
 0.998
DDX39B
ATP-dependent RNA helicase UAP56/SUB2.
   
 0.995
SRRT
Serrate, RNA effector molecule.
   
 0.985
THOC7
THO complex 7.
   
 0.983
THOC5
THO complex 5.
   
 0.982
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.982
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.981
UPF3A
Smg4_UPF3 domain-containing protein.
    
 0.981
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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