Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FSD1L | PDRG1 | ENSMFAP00000009108 | ENSMFAP00000004480 | Fibronectin type III and SPRY domain containing 1 like. | P53 and DNA damage regulated 1. | 0.637 |
FSD1L | TP73 | ENSMFAP00000009108 | ENSMFAP00000024784 | Fibronectin type III and SPRY domain containing 1 like. | Tumor protein p73; Participates in the apoptotic response to DNA damage. Isoforms containing the transactivation domain are pro-apoptotic, isoforms lacking the domain are anti-apoptotic and block the function of p53 and transactivating p73 isoforms. May be a tumor suppressor protein. | 0.448 |
FSD1L | UPF1 | ENSMFAP00000009108 | ENSMFAP00000037204 | Fibronectin type III and SPRY domain containing 1 like. | UPF1 RNA helicase and ATPase. | 0.518 |
FSD1L | UPF3B | ENSMFAP00000009108 | ENSMFAP00000028125 | Fibronectin type III and SPRY domain containing 1 like. | UPF3B regulator of nonsense mediated mRNA decay. | 0.623 |
PDRG1 | FSD1L | ENSMFAP00000004480 | ENSMFAP00000009108 | P53 and DNA damage regulated 1. | Fibronectin type III and SPRY domain containing 1 like. | 0.637 |
PDRG1 | UPF1 | ENSMFAP00000004480 | ENSMFAP00000037204 | P53 and DNA damage regulated 1. | UPF1 RNA helicase and ATPase. | 0.523 |
PDRG1 | UPF3B | ENSMFAP00000004480 | ENSMFAP00000028125 | P53 and DNA damage regulated 1. | UPF3B regulator of nonsense mediated mRNA decay. | 0.636 |
TP73 | FSD1L | ENSMFAP00000024784 | ENSMFAP00000009108 | Tumor protein p73; Participates in the apoptotic response to DNA damage. Isoforms containing the transactivation domain are pro-apoptotic, isoforms lacking the domain are anti-apoptotic and block the function of p53 and transactivating p73 isoforms. May be a tumor suppressor protein. | Fibronectin type III and SPRY domain containing 1 like. | 0.448 |
UPF1 | FSD1L | ENSMFAP00000037204 | ENSMFAP00000009108 | UPF1 RNA helicase and ATPase. | Fibronectin type III and SPRY domain containing 1 like. | 0.518 |
UPF1 | PDRG1 | ENSMFAP00000037204 | ENSMFAP00000004480 | UPF1 RNA helicase and ATPase. | P53 and DNA damage regulated 1. | 0.523 |
UPF1 | UPF3B | ENSMFAP00000037204 | ENSMFAP00000028125 | UPF1 RNA helicase and ATPase. | UPF3B regulator of nonsense mediated mRNA decay. | 0.993 |
UPF3B | FSD1L | ENSMFAP00000028125 | ENSMFAP00000009108 | UPF3B regulator of nonsense mediated mRNA decay. | Fibronectin type III and SPRY domain containing 1 like. | 0.623 |
UPF3B | PDRG1 | ENSMFAP00000028125 | ENSMFAP00000004480 | UPF3B regulator of nonsense mediated mRNA decay. | P53 and DNA damage regulated 1. | 0.636 |
UPF3B | UPF1 | ENSMFAP00000028125 | ENSMFAP00000037204 | UPF3B regulator of nonsense mediated mRNA decay. | UPF1 RNA helicase and ATPase. | 0.993 |