Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GDF9 | NLRP5 | ENSMFAP00000003470 | ENSMFAP00000038181 | Growth differentiation factor 9. | NACHT domain-containing protein. | 0.493 |
GDF9 | ZP1 | ENSMFAP00000003470 | ENSMFAP00000039946 | Growth differentiation factor 9. | Zona pellucida glycoprotein 1. | 0.795 |
GDF9 | ZP2 | ENSMFAP00000003470 | ENSMFAP00000036480 | Growth differentiation factor 9. | ZP domain-containing protein. | 0.764 |
GDF9 | ZP3 | ENSMFAP00000003470 | ENSMFAP00000032022 | Growth differentiation factor 9. | ZP domain-containing protein. | 0.621 |
GDF9 | ZP4 | ENSMFAP00000003470 | ENSMFAP00000009159 | Growth differentiation factor 9. | Uncharacterized protein. | 0.555 |
HYAL2 | ZP4 | ENSMFAP00000046116 | ENSMFAP00000009159 | Hyaluronidase. | Uncharacterized protein. | 0.463 |
HYAL4 | ZP4 | ENSMFAP00000030443 | ENSMFAP00000009159 | Hyaluronidase. | Uncharacterized protein. | 0.474 |
NLRP5 | GDF9 | ENSMFAP00000038181 | ENSMFAP00000003470 | NACHT domain-containing protein. | Growth differentiation factor 9. | 0.493 |
NLRP5 | ZP1 | ENSMFAP00000038181 | ENSMFAP00000039946 | NACHT domain-containing protein. | Zona pellucida glycoprotein 1. | 0.481 |
NLRP5 | ZP2 | ENSMFAP00000038181 | ENSMFAP00000036480 | NACHT domain-containing protein. | ZP domain-containing protein. | 0.481 |
NLRP5 | ZP4 | ENSMFAP00000038181 | ENSMFAP00000009159 | NACHT domain-containing protein. | Uncharacterized protein. | 0.440 |
OVGP1 | ZP1 | ENSMFAP00000035862 | ENSMFAP00000039946 | Oviductal glycoprotein 1; Belongs to the glycosyl hydrolase 18 family. | Zona pellucida glycoprotein 1. | 0.455 |
OVGP1 | ZP2 | ENSMFAP00000035862 | ENSMFAP00000036480 | Oviductal glycoprotein 1; Belongs to the glycosyl hydrolase 18 family. | ZP domain-containing protein. | 0.440 |
OVGP1 | ZP3 | ENSMFAP00000035862 | ENSMFAP00000032022 | Oviductal glycoprotein 1; Belongs to the glycosyl hydrolase 18 family. | ZP domain-containing protein. | 0.530 |
OVGP1 | ZP4 | ENSMFAP00000035862 | ENSMFAP00000009159 | Oviductal glycoprotein 1; Belongs to the glycosyl hydrolase 18 family. | Uncharacterized protein. | 0.440 |
SPAM1 | ZP1 | ENSMFAP00000006823 | ENSMFAP00000039946 | Hyaluronidase PH-20; Involved in sperm-egg adhesion. Upon fertilization sperm must first penetrate a layer of cumulus cells that surrounds the egg before reaching the zona pellucida. The cumulus cells are embedded in a matrix containing hyaluronic acid which is formed prior to ovulation. This protein aids in penetrating the layer of cumulus cells by digesting hyaluronic acid. | Zona pellucida glycoprotein 1. | 0.458 |
SPAM1 | ZP2 | ENSMFAP00000006823 | ENSMFAP00000036480 | Hyaluronidase PH-20; Involved in sperm-egg adhesion. Upon fertilization sperm must first penetrate a layer of cumulus cells that surrounds the egg before reaching the zona pellucida. The cumulus cells are embedded in a matrix containing hyaluronic acid which is formed prior to ovulation. This protein aids in penetrating the layer of cumulus cells by digesting hyaluronic acid. | ZP domain-containing protein. | 0.461 |
SPAM1 | ZP3 | ENSMFAP00000006823 | ENSMFAP00000032022 | Hyaluronidase PH-20; Involved in sperm-egg adhesion. Upon fertilization sperm must first penetrate a layer of cumulus cells that surrounds the egg before reaching the zona pellucida. The cumulus cells are embedded in a matrix containing hyaluronic acid which is formed prior to ovulation. This protein aids in penetrating the layer of cumulus cells by digesting hyaluronic acid. | ZP domain-containing protein. | 0.491 |
SPAM1 | ZP4 | ENSMFAP00000006823 | ENSMFAP00000009159 | Hyaluronidase PH-20; Involved in sperm-egg adhesion. Upon fertilization sperm must first penetrate a layer of cumulus cells that surrounds the egg before reaching the zona pellucida. The cumulus cells are embedded in a matrix containing hyaluronic acid which is formed prior to ovulation. This protein aids in penetrating the layer of cumulus cells by digesting hyaluronic acid. | Uncharacterized protein. | 0.474 |
ZP1 | GDF9 | ENSMFAP00000039946 | ENSMFAP00000003470 | Zona pellucida glycoprotein 1. | Growth differentiation factor 9. | 0.795 |
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