Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BOP1 | KIRREL1 | ENSMFAP00000016259 | ENSMFAP00000009991 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Kirre like nephrin family adhesion molecule 1. | 0.611 |
CAPN8 | CD5L | ENSMFAP00000007132 | ENSMFAP00000032202 | Calpain 8; Belongs to the peptidase C2 family. | CD5 molecule like. | 0.624 |
CAPN8 | KIRREL1 | ENSMFAP00000007132 | ENSMFAP00000009991 | Calpain 8; Belongs to the peptidase C2 family. | Kirre like nephrin family adhesion molecule 1. | 0.681 |
CD2AP | KIRREL1 | ENSMFAP00000030741 | ENSMFAP00000009991 | CD2 associated protein. | Kirre like nephrin family adhesion molecule 1. | 0.674 |
CD2AP | NPHS1 | ENSMFAP00000030741 | ENSMFAP00000030997 | CD2 associated protein. | NPHS1 adhesion molecule, nephrin. | 0.849 |
CD2AP | NPHS2 | ENSMFAP00000030741 | ENSMFAP00000009698 | CD2 associated protein. | NPHS2 stomatin family member, podocin. | 0.731 |
CD2AP | TJP1 | ENSMFAP00000030741 | ENSMFAP00000033811 | CD2 associated protein. | Tight junction protein 1; Belongs to the MAGUK family. | 0.630 |
CD5L | CAPN8 | ENSMFAP00000032202 | ENSMFAP00000007132 | CD5 molecule like. | Calpain 8; Belongs to the peptidase C2 family. | 0.624 |
CD5L | KIRREL1 | ENSMFAP00000032202 | ENSMFAP00000009991 | CD5 molecule like. | Kirre like nephrin family adhesion molecule 1. | 0.629 |
FAT1 | KIRREL1 | ENSMFAP00000036534 | ENSMFAP00000009991 | FAT atypical cadherin 1. | Kirre like nephrin family adhesion molecule 1. | 0.559 |
FAT1 | NPHS1 | ENSMFAP00000036534 | ENSMFAP00000030997 | FAT atypical cadherin 1. | NPHS1 adhesion molecule, nephrin. | 0.560 |
FAT1 | NPHS2 | ENSMFAP00000036534 | ENSMFAP00000009698 | FAT atypical cadherin 1. | NPHS2 stomatin family member, podocin. | 0.603 |
KIRREL1 | BOP1 | ENSMFAP00000009991 | ENSMFAP00000016259 | Kirre like nephrin family adhesion molecule 1. | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.611 |
KIRREL1 | CAPN8 | ENSMFAP00000009991 | ENSMFAP00000007132 | Kirre like nephrin family adhesion molecule 1. | Calpain 8; Belongs to the peptidase C2 family. | 0.681 |
KIRREL1 | CD2AP | ENSMFAP00000009991 | ENSMFAP00000030741 | Kirre like nephrin family adhesion molecule 1. | CD2 associated protein. | 0.674 |
KIRREL1 | CD5L | ENSMFAP00000009991 | ENSMFAP00000032202 | Kirre like nephrin family adhesion molecule 1. | CD5 molecule like. | 0.629 |
KIRREL1 | FAT1 | ENSMFAP00000009991 | ENSMFAP00000036534 | Kirre like nephrin family adhesion molecule 1. | FAT atypical cadherin 1. | 0.559 |
KIRREL1 | NCK1 | ENSMFAP00000009991 | ENSMFAP00000026952 | Kirre like nephrin family adhesion molecule 1. | Cytoplasmic protein. | 0.591 |
KIRREL1 | NPHS1 | ENSMFAP00000009991 | ENSMFAP00000030997 | Kirre like nephrin family adhesion molecule 1. | NPHS1 adhesion molecule, nephrin. | 0.968 |
KIRREL1 | NPHS2 | ENSMFAP00000009991 | ENSMFAP00000009698 | Kirre like nephrin family adhesion molecule 1. | NPHS2 stomatin family member, podocin. | 0.639 |
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