STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMA7Uncharacterized protein. (64 aa)    
Predicted Functional Partners:
POMP
Uncharacterized protein.
   
    0.575
UBL5
Testis cDNA, clone: QtsA-15893, similar to human ubiquitin-like 5 (UBL5).
   
    0.560
ENSMFAP00000033862
Uncharacterized protein.
   
    0.560
ENSMFAP00000012257
Ubiquitin-like domain-containing protein.
   
    0.540
ENSMFAP00000021066
Ubiquitin-like domain-containing protein.
   
    0.540
NEDD8
Ubiquitin-like domain-containing protein.
   
    0.540
SUB1
Activated RNA polymerase II transcriptional coactivator p15; General coactivator that functions cooperatively with TAFs and mediates functional interactions between upstream activators and the general transcriptional machinery. May be involved in stabilizing the multiprotein transcription complex. Binds single-stranded DNA. Also binds, in vitro, non-specifically to double-stranded DNA (ds DNA) (By similarity).
   
    0.526
ENSMFAP00000028575
PC4 domain-containing protein.
   
    0.526
SNRPF
Sm domain-containing protein.
   
  
 0.431
SERF2
4F5 domain-containing protein.
   
    0.429
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.