Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC7Zinc finger CCHC-type containing 7. (543 aa)    
Predicted Functional Partners:
MTREX
Mtr4 exosome RNA helicase.
   
 0.984
TENT4B
Terminal nucleotidyltransferase 4B.
   
 0.972
TENT4A
Terminal nucleotidyltransferase 4A.
   
 0.957
EXOSC1
Exosome component 1.
   
 
 0.812
EXOSC9
Exosome component 9.
   
 
 0.797
EXOSC4
Exosome component 4.
   
 
 0.794
EXOSC8
Exosome component 8.
   
 0.785
PUM3
Pumilio RNA binding family member 3.
   
   0.761
EXOSC3
Exosome component 3.
   
 
 0.751
DIS3L
DIS3 like exosome 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.
   
 0.728
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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