Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PRPF38BPre-mRNA processing factor 38B. (546 aa)    
Predicted Functional Partners:
PRPF38A
Pre-mRNA-splicing factor 38A; Involved in pre-mRNA splicing as a component of the spliceosome.
   
 
 
0.904
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
 
 0.849
RBM25
RNA binding motif protein 25.
   
  
 0.808
SRSF11
Serine and arginine rich splicing factor 11.
   
 
 0.799
PNN
Pinin, desmosome associated protein.
   
    0.791
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
 
 0.671
ZC3H18
Zinc finger CCCH-type containing 18.
   
   0.637
RBM39-2
Uncharacterized protein.
   
  
 0.624
RBM39
RNA binding motif protein 39.
   
  
 0.624
LUC7L
LUC7 like.
   
 
 0.606
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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