Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RNF217RBR-type E3 ubiquitin transferase. (542 aa)    
Predicted Functional Partners:
UBE2L5
Ubiquitin conjugating enzyme E2 L5; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.622
UBE2L6
Ubiquitin conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.622
LOC102140123
Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.622
ENSMFAP00000013814
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.622
ENSMFAP00000013942
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.622
SLC35E3
Solute carrier family 35 member E3.
   
  
 0.604
ARIH2
RBR-type E3 ubiquitin transferase.
   
 0.598
ENSMFAP00000033724
IBR domain-containing protein.
   
 0.598
UBC
Ubiquitin C.
    
 0.558
UBB
Uncharacterized protein.
    
 0.558
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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