Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHF1Pleckstrin homology and FYVE domain containing 1. (279 aa)    
Predicted Functional Partners:
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
    
 0.509
ZADH2
Zinc binding alcohol dehydrogenase domain containing 2.
      
 0.504
TRIM11
Tripartite motif containing 11.
      
 0.487
GGCT
Uncharacterized protein.
      
 0.466
GLIPR2
Testis cDNA clone: QtsA-11864, similar to human chromosome 9 open reading frame 19 (C9orf19); Belongs to the CRISP family.
    
 
 0.454
RHOU
Ras homolog family member U.
    
 0.451
KCTD11
Potassium channel tetramerization domain containing 11.
      
 0.446
SLC29A4
Solute carrier family 29 member 4.
   
  
 0.446
MAP3K6
Mitogen-activated protein kinase kinase kinase 6.
      
 0.442
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
    
 0.433
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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