Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LAMA1Laminin subunit alpha 1. (3079 aa)    
Predicted Functional Partners:
DAG1
Dystroglycan 1.
    
 0.934
LAMA2
Laminin subunit alpha 2.
  
 
0.927
LAMC1
Laminin subunit gamma 1.
   
0.910
CD44
CD44 molecule (Indian blood group).
     
 0.904
ITGA2
Integrin subunit alpha 2; Belongs to the integrin alpha chain family.
    
 0.832
ITGA7
Integrin subunit alpha 7; Belongs to the integrin alpha chain family.
    
 0.818
ITGA1
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
    
 0.818
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
    
 0.818
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.803
ITGA3
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
    
 0.787
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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