Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC102128765IF rod domain-containing protein; Belongs to the intermediate filament family. (416 aa)    
Predicted Functional Partners:
KRT32
Keratin 32; Belongs to the intermediate filament family.
   
 
  0.932
KRT35
Keratin 35; Belongs to the intermediate filament family.
   
 
  0.930
KRT33B
Keratin 33B; Belongs to the intermediate filament family.
   
  0.929
KRT38
Keratin 38; Belongs to the intermediate filament family.
   
  0.924
KRT37
Keratin 37; Belongs to the intermediate filament family.
   
  0.924
KRT36
Keratin 36; Belongs to the intermediate filament family.
   
 
  0.922
KRT24
Keratin 24; Belongs to the intermediate filament family.
   
 
  0.832
KRT33A
Keratin 33A; Belongs to the intermediate filament family.
   
  0.828
KRT34
Keratin 34; Belongs to the intermediate filament family.
   
  0.674
KRT76
Keratin 76; Belongs to the intermediate filament family.
   
  0.658
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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