Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102138794RING-type domain-containing protein. (321 aa)    
Predicted Functional Partners:
RING1
Ring finger protein 1.
   
 0.988
BMI1
RING-type domain-containing protein.
   
 0.952
CBX4
Chromobox 4.
    
 0.951
PCGF2
Polycomb group ring finger 2.
   
 0.949
CBX8
Chromobox 8.
    
 0.948
CBX2
Chromobox 2.
    
 0.944
PCGF6
Polycomb group ring finger 6.
   
 0.939
RYBP
RING1 and YY1 binding protein.
    
 0.937
PCGF5
Polycomb group ring finger 5.
   
 0.932
YAF2
RanBP2-type domain-containing protein.
    
 0.931
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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