Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM60Transmembrane protein 60. (133 aa)    
Predicted Functional Partners:
TMEM50A
Transmembrane protein 50A.
      
 0.585
TMEM236
Transmembrane protein 236.
      
 0.553
TMEM217
Transmembrane protein 217.
      
 0.514
LARP4B
La ribonucleoprotein domain family member 4B.
      
 0.504
FAM229B
Protein FAM229B; Belongs to the FAM229 family.
      
 0.476
PPIG
Peptidylprolyl isomerase G.
      
 0.475
TVP23B
Golgi apparatus membrane protein TVP23 homolog.
   
  
 0.443
CDRT4
CMT1A duplicated region transcript 4.
   
  
 0.443
SERTAD3
SERTA domain containing 3.
   
  
 0.439
CASC3
CASC3 exon junction complex subunit.
      
 0.433
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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