Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CASP3 | SPTA1 | ENSMFAP00000031823 | ENSMFAP00000013861 | Caspase-3 subunit p12; Involved in the activation cascade of caspases responsible for apoptosis execution. At the onset of apoptosis it proteolytically cleaves poly(ADP-ribose) polymerase (PARP) at a '216-Asp-|-Gly-217' bond. Cleaves and activates sterol regulatory element binding proteins (SREBPs) between the basic helix-loop-helix leucine zipper domain and the membrane attachment domain. Cleaves and activates caspase-6, -7 and -9. Involved in the cleavage of huntingtin. Triggers cell adhesion in sympathetic neurons through RET cleavage (By similarity). Belongs to the peptidase C14A family. | Spectrin alpha, erythrocytic 1. | 0.925 |
CASP3 | SPTAN1 | ENSMFAP00000031823 | ENSMFAP00000025485 | Caspase-3 subunit p12; Involved in the activation cascade of caspases responsible for apoptosis execution. At the onset of apoptosis it proteolytically cleaves poly(ADP-ribose) polymerase (PARP) at a '216-Asp-|-Gly-217' bond. Cleaves and activates sterol regulatory element binding proteins (SREBPs) between the basic helix-loop-helix leucine zipper domain and the membrane attachment domain. Cleaves and activates caspase-6, -7 and -9. Involved in the cleavage of huntingtin. Triggers cell adhesion in sympathetic neurons through RET cleavage (By similarity). Belongs to the peptidase C14A family. | Spectrin alpha, non-erythrocytic 1. | 0.963 |
EPB42 | RHAG | ENSMFAP00000022975 | ENSMFAP00000030999 | Erythrocyte membrane protein band 4.2. | Rh associated glycoprotein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily. | 0.894 |
EPB42 | SPTA1 | ENSMFAP00000022975 | ENSMFAP00000013861 | Erythrocyte membrane protein band 4.2. | Spectrin alpha, erythrocytic 1. | 0.727 |
ITSN2 | SPTA1 | ENSMFAP00000029438 | ENSMFAP00000013861 | Intersectin 2. | Spectrin alpha, erythrocytic 1. | 0.925 |
ITSN2 | SPTAN1 | ENSMFAP00000029438 | ENSMFAP00000025485 | Intersectin 2. | Spectrin alpha, non-erythrocytic 1. | 0.925 |
ITSN2 | SPTB | ENSMFAP00000029438 | ENSMFAP00000038484 | Intersectin 2. | Spectrin beta chain; Belongs to the spectrin family. | 0.717 |
ITSN2 | SPTBN1 | ENSMFAP00000029438 | ENSMFAP00000034111 | Intersectin 2. | Spectrin beta chain; Belongs to the spectrin family. | 0.717 |
ITSN2 | SPTBN2 | ENSMFAP00000029438 | ENSMFAP00000031376 | Intersectin 2. | Spectrin beta chain; Belongs to the spectrin family. | 0.717 |
ITSN2 | SPTBN4 | ENSMFAP00000029438 | ENSMFAP00000036895 | Intersectin 2. | Spectrin beta chain; Belongs to the spectrin family. | 0.717 |
ITSN2 | SPTBN5 | ENSMFAP00000029438 | ENSMFAP00000042791 | Intersectin 2. | Spectrin beta, non-erythrocytic 5. | 0.717 |
RHAG | EPB42 | ENSMFAP00000030999 | ENSMFAP00000022975 | Rh associated glycoprotein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily. | Erythrocyte membrane protein band 4.2. | 0.894 |
RHAG | SPTA1 | ENSMFAP00000030999 | ENSMFAP00000013861 | Rh associated glycoprotein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily. | Spectrin alpha, erythrocytic 1. | 0.866 |
SPTA1 | CASP3 | ENSMFAP00000013861 | ENSMFAP00000031823 | Spectrin alpha, erythrocytic 1. | Caspase-3 subunit p12; Involved in the activation cascade of caspases responsible for apoptosis execution. At the onset of apoptosis it proteolytically cleaves poly(ADP-ribose) polymerase (PARP) at a '216-Asp-|-Gly-217' bond. Cleaves and activates sterol regulatory element binding proteins (SREBPs) between the basic helix-loop-helix leucine zipper domain and the membrane attachment domain. Cleaves and activates caspase-6, -7 and -9. Involved in the cleavage of huntingtin. Triggers cell adhesion in sympathetic neurons through RET cleavage (By similarity). Belongs to the peptidase C14A family. | 0.925 |
SPTA1 | EPB42 | ENSMFAP00000013861 | ENSMFAP00000022975 | Spectrin alpha, erythrocytic 1. | Erythrocyte membrane protein band 4.2. | 0.727 |
SPTA1 | ITSN2 | ENSMFAP00000013861 | ENSMFAP00000029438 | Spectrin alpha, erythrocytic 1. | Intersectin 2. | 0.925 |
SPTA1 | RHAG | ENSMFAP00000013861 | ENSMFAP00000030999 | Spectrin alpha, erythrocytic 1. | Rh associated glycoprotein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily. | 0.866 |
SPTA1 | SPTAN1 | ENSMFAP00000013861 | ENSMFAP00000025485 | Spectrin alpha, erythrocytic 1. | Spectrin alpha, non-erythrocytic 1. | 0.929 |
SPTA1 | SPTB | ENSMFAP00000013861 | ENSMFAP00000038484 | Spectrin alpha, erythrocytic 1. | Spectrin beta chain; Belongs to the spectrin family. | 0.974 |
SPTA1 | SPTBN1 | ENSMFAP00000013861 | ENSMFAP00000034111 | Spectrin alpha, erythrocytic 1. | Spectrin beta chain; Belongs to the spectrin family. | 0.898 |
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