Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BRIX1 | EBNA1BP2 | ENSMFAP00000020249 | ENSMFAP00000037139 | Biogenesis of ribosomes BRX1. | EBNA1 binding protein 2. | 0.996 |
BRIX1 | ENSMFAP00000015260 | ENSMFAP00000020249 | ENSMFAP00000015260 | Biogenesis of ribosomes BRX1. | TRASH domain-containing protein. | 0.910 |
BRIX1 | FTSJ3 | ENSMFAP00000020249 | ENSMFAP00000034586 | Biogenesis of ribosomes BRX1. | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.962 |
BRIX1 | GNL2 | ENSMFAP00000020249 | ENSMFAP00000002863 | Biogenesis of ribosomes BRX1. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.935 |
BRIX1 | GTPBP4 | ENSMFAP00000020249 | ENSMFAP00000040177 | Biogenesis of ribosomes BRX1. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.993 |
BRIX1 | MAK16 | ENSMFAP00000020249 | ENSMFAP00000016167 | Biogenesis of ribosomes BRX1. | Protein MAK16 homolog; Belongs to the MAK16 family. | 0.981 |
BRIX1 | MRTO4 | ENSMFAP00000020249 | ENSMFAP00000020526 | Biogenesis of ribosomes BRX1. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.981 |
BRIX1 | NIFK | ENSMFAP00000020249 | ENSMFAP00000016163 | Biogenesis of ribosomes BRX1. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.996 |
BRIX1 | NMD3 | ENSMFAP00000020249 | ENSMFAP00000001222 | Biogenesis of ribosomes BRX1. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.794 |
BRIX1 | PES1 | ENSMFAP00000020249 | ENSMFAP00000026653 | Biogenesis of ribosomes BRX1. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. | 0.988 |
EBNA1BP2 | BRIX1 | ENSMFAP00000037139 | ENSMFAP00000020249 | EBNA1 binding protein 2. | Biogenesis of ribosomes BRX1. | 0.996 |
EBNA1BP2 | ENSMFAP00000015260 | ENSMFAP00000037139 | ENSMFAP00000015260 | EBNA1 binding protein 2. | TRASH domain-containing protein. | 0.910 |
EBNA1BP2 | FTSJ3 | ENSMFAP00000037139 | ENSMFAP00000034586 | EBNA1 binding protein 2. | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.987 |
EBNA1BP2 | GNL2 | ENSMFAP00000037139 | ENSMFAP00000002863 | EBNA1 binding protein 2. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.974 |
EBNA1BP2 | GTPBP4 | ENSMFAP00000037139 | ENSMFAP00000040177 | EBNA1 binding protein 2. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.988 |
EBNA1BP2 | MAK16 | ENSMFAP00000037139 | ENSMFAP00000016167 | EBNA1 binding protein 2. | Protein MAK16 homolog; Belongs to the MAK16 family. | 0.982 |
EBNA1BP2 | MRTO4 | ENSMFAP00000037139 | ENSMFAP00000020526 | EBNA1 binding protein 2. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.985 |
EBNA1BP2 | NIFK | ENSMFAP00000037139 | ENSMFAP00000016163 | EBNA1 binding protein 2. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.995 |
EBNA1BP2 | NMD3 | ENSMFAP00000037139 | ENSMFAP00000001222 | EBNA1 binding protein 2. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.828 |
EBNA1BP2 | PES1 | ENSMFAP00000037139 | ENSMFAP00000026653 | EBNA1 binding protein 2. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. | 0.999 |
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