Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDKN2A | ENSMFAP00000016028 | ENSMFAP00000024058 | ENSMFAP00000016028 | ANK_REP_REGION domain-containing protein. | Uncharacterized protein. | 0.426 |
CDKN2A | MDM2 | ENSMFAP00000024058 | ENSMFAP00000031228 | ANK_REP_REGION domain-containing protein. | E3 ubiquitin-protein ligase Mdm2; Belongs to the MDM2/MDM4 family. | 0.995 |
CDKN2A | TP53 | ENSMFAP00000024058 | ENSMFAP00000038526 | ANK_REP_REGION domain-containing protein. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression. Its pro-apoptotic activity is activated via its intera [...] | 0.986 |
CENPA | ENSMFAP00000016028 | ENSMFAP00000039327 | ENSMFAP00000016028 | Centromere protein A. | Uncharacterized protein. | 0.470 |
CENPA | HJURP | ENSMFAP00000039327 | ENSMFAP00000009301 | Centromere protein A. | Holliday junction recognition protein. | 0.991 |
CENPA | RUVBL1 | ENSMFAP00000039327 | ENSMFAP00000033775 | Centromere protein A. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.682 |
ENSMFAP00000016028 | CDKN2A | ENSMFAP00000016028 | ENSMFAP00000024058 | Uncharacterized protein. | ANK_REP_REGION domain-containing protein. | 0.426 |
ENSMFAP00000016028 | CENPA | ENSMFAP00000016028 | ENSMFAP00000039327 | Uncharacterized protein. | Centromere protein A. | 0.470 |
ENSMFAP00000016028 | HJURP | ENSMFAP00000016028 | ENSMFAP00000009301 | Uncharacterized protein. | Holliday junction recognition protein. | 0.522 |
ENSMFAP00000016028 | MDM2 | ENSMFAP00000016028 | ENSMFAP00000031228 | Uncharacterized protein. | E3 ubiquitin-protein ligase Mdm2; Belongs to the MDM2/MDM4 family. | 0.433 |
ENSMFAP00000016028 | NCL | ENSMFAP00000016028 | ENSMFAP00000031078 | Uncharacterized protein. | Nucleolin; Nucleolin is the major nucleolar protein of growing eukaryotic cells. It is found associated with intranucleolar chromatin and pre-ribosomal particles. It induces chromatin decondensation by binding to histone H1. It is thought to play a role in pre-rRNA transcription and ribosome assembly. May play a role in the process of transcriptional elongation. Binds RNA oligonucleotides with 5'-UUAGGG- 3' repeats more tightly than the telomeric single-stranded DNA 5'- TTAGGG-3' repeats (By similarity). | 0.709 |
ENSMFAP00000016028 | NOP58 | ENSMFAP00000016028 | ENSMFAP00000031804 | Uncharacterized protein. | Nucleolar protein 58; Required for 60S ribosomal subunit biogenesis (By similarity). Core component of box C/D small nucleolar ribonucleoprotein (snoRNP) particles. Required for the biogenesis of box C/D snoRNAs such as U3, U8 and U14 snoRNAs (By similarity). Belongs to the NOP5/NOP56 family. | 0.459 |
ENSMFAP00000016028 | NPM3 | ENSMFAP00000016028 | ENSMFAP00000029222 | Uncharacterized protein. | Nucleophosmin/nucleoplasmin 3. | 0.467 |
ENSMFAP00000016028 | RUVBL1 | ENSMFAP00000016028 | ENSMFAP00000033775 | Uncharacterized protein. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.443 |
ENSMFAP00000016028 | SNU13 | ENSMFAP00000016028 | ENSMFAP00000015811 | Uncharacterized protein. | NHP2-like protein 1, N-terminally processed; Involved in pre-mRNA splicing as component of the spliceosome. Binds to the 5'-stem-loop of U4 snRNA and thereby contributes to spliceosome assembly. The protein undergoes a conformational change upon RNA-binding. | 0.422 |
ENSMFAP00000016028 | TP53 | ENSMFAP00000016028 | ENSMFAP00000038526 | Uncharacterized protein. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression. Its pro-apoptotic activity is activated via its intera [...] | 0.548 |
HJURP | CENPA | ENSMFAP00000009301 | ENSMFAP00000039327 | Holliday junction recognition protein. | Centromere protein A. | 0.991 |
HJURP | ENSMFAP00000016028 | ENSMFAP00000009301 | ENSMFAP00000016028 | Holliday junction recognition protein. | Uncharacterized protein. | 0.522 |
HJURP | RUVBL1 | ENSMFAP00000009301 | ENSMFAP00000033775 | Holliday junction recognition protein. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.701 |
MDM2 | CDKN2A | ENSMFAP00000031228 | ENSMFAP00000024058 | E3 ubiquitin-protein ligase Mdm2; Belongs to the MDM2/MDM4 family. | ANK_REP_REGION domain-containing protein. | 0.995 |
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