Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARL14EPL | ATF7IP | ENSMFAP00000021553 | ENSMFAP00000027610 | ADP ribosylation factor like GTPase 14 effector protein like. | Activating transcription factor 7 interacting protein. | 0.755 |
ARL14EPL | ATF7IP2 | ENSMFAP00000021553 | ENSMFAP00000017676 | ADP ribosylation factor like GTPase 14 effector protein like. | Activating transcription factor 7 interacting protein 2. | 0.664 |
ARL14EPL | MED21 | ENSMFAP00000021553 | ENSMFAP00000028991 | ADP ribosylation factor like GTPase 14 effector protein like. | Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.404 |
ARL14EPL | SETDB1 | ENSMFAP00000021553 | ENSMFAP00000030359 | ADP ribosylation factor like GTPase 14 effector protein like. | SET domain bifurcated histone lysine methyltransferase 1. | 0.709 |
ARL14EPL | SETDB2 | ENSMFAP00000021553 | ENSMFAP00000019340 | ADP ribosylation factor like GTPase 14 effector protein like. | SET domain bifurcated histone lysine methyltransferase 2. | 0.709 |
ARL14EPL | SUOX | ENSMFAP00000021553 | ENSMFAP00000042310 | ADP ribosylation factor like GTPase 14 effector protein like. | Sulfite oxidase, mitochondrial. | 0.610 |
ARL14EPL | TMEM65 | ENSMFAP00000021553 | ENSMFAP00000024480 | ADP ribosylation factor like GTPase 14 effector protein like. | Transmembrane protein 65. | 0.414 |
ATF7IP | ARL14EPL | ENSMFAP00000027610 | ENSMFAP00000021553 | Activating transcription factor 7 interacting protein. | ADP ribosylation factor like GTPase 14 effector protein like. | 0.755 |
ATF7IP | SETDB1 | ENSMFAP00000027610 | ENSMFAP00000030359 | Activating transcription factor 7 interacting protein. | SET domain bifurcated histone lysine methyltransferase 1. | 0.952 |
ATF7IP | SETDB2 | ENSMFAP00000027610 | ENSMFAP00000019340 | Activating transcription factor 7 interacting protein. | SET domain bifurcated histone lysine methyltransferase 2. | 0.920 |
ATF7IP2 | ARL14EPL | ENSMFAP00000017676 | ENSMFAP00000021553 | Activating transcription factor 7 interacting protein 2. | ADP ribosylation factor like GTPase 14 effector protein like. | 0.664 |
ATF7IP2 | SETDB1 | ENSMFAP00000017676 | ENSMFAP00000030359 | Activating transcription factor 7 interacting protein 2. | SET domain bifurcated histone lysine methyltransferase 1. | 0.891 |
ATF7IP2 | SETDB2 | ENSMFAP00000017676 | ENSMFAP00000019340 | Activating transcription factor 7 interacting protein 2. | SET domain bifurcated histone lysine methyltransferase 2. | 0.872 |
MED21 | ARL14EPL | ENSMFAP00000028991 | ENSMFAP00000021553 | Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | ADP ribosylation factor like GTPase 14 effector protein like. | 0.404 |
SETDB1 | ARL14EPL | ENSMFAP00000030359 | ENSMFAP00000021553 | SET domain bifurcated histone lysine methyltransferase 1. | ADP ribosylation factor like GTPase 14 effector protein like. | 0.709 |
SETDB1 | ATF7IP | ENSMFAP00000030359 | ENSMFAP00000027610 | SET domain bifurcated histone lysine methyltransferase 1. | Activating transcription factor 7 interacting protein. | 0.952 |
SETDB1 | ATF7IP2 | ENSMFAP00000030359 | ENSMFAP00000017676 | SET domain bifurcated histone lysine methyltransferase 1. | Activating transcription factor 7 interacting protein 2. | 0.891 |
SETDB2 | ARL14EPL | ENSMFAP00000019340 | ENSMFAP00000021553 | SET domain bifurcated histone lysine methyltransferase 2. | ADP ribosylation factor like GTPase 14 effector protein like. | 0.709 |
SETDB2 | ATF7IP | ENSMFAP00000019340 | ENSMFAP00000027610 | SET domain bifurcated histone lysine methyltransferase 2. | Activating transcription factor 7 interacting protein. | 0.920 |
SETDB2 | ATF7IP2 | ENSMFAP00000019340 | ENSMFAP00000017676 | SET domain bifurcated histone lysine methyltransferase 2. | Activating transcription factor 7 interacting protein 2. | 0.872 |
page 1 of 2