Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BUD31 | CDC40 | ENSMFAP00000021330 | ENSMFAP00000005369 | BUD31 homolog. | Cell division cycle 40. | 0.982 |
BUD31 | CRNKL1 | ENSMFAP00000021330 | ENSMFAP00000042238 | BUD31 homolog. | Crooked neck pre-mRNA splicing factor 1. | 0.999 |
BUD31 | DHX15 | ENSMFAP00000021330 | ENSMFAP00000034246 | BUD31 homolog. | DEAH-box helicase 15. | 0.958 |
BUD31 | DQX1 | ENSMFAP00000021330 | ENSMFAP00000004370 | BUD31 homolog. | DEAQ-box RNA dependent ATPase 1. | 0.806 |
BUD31 | EFTUD2 | ENSMFAP00000021330 | ENSMFAP00000031098 | BUD31 homolog. | Elongation factor Tu GTP binding domain containing 2. | 0.985 |
BUD31 | PRPF8 | ENSMFAP00000021330 | ENSMFAP00000042847 | BUD31 homolog. | Pre-mRNA processing factor 8. | 0.982 |
BUD31 | SNRPA1 | ENSMFAP00000021330 | ENSMFAP00000012116 | BUD31 homolog. | U2 small nuclear ribonucleoprotein A; Involved in pre-mRNA splicing as component of the spliceosome. Associated with sn-RNP U2, where it contributes to the binding of stem loop IV of U2 snRNA. | 0.980 |
BUD31 | SYF2 | ENSMFAP00000021330 | ENSMFAP00000029106 | BUD31 homolog. | SYF2 pre-mRNA splicing factor. | 0.983 |
BUD31 | TFIP11 | ENSMFAP00000021330 | ENSMFAP00000023492 | BUD31 homolog. | Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...] | 0.948 |
BUD31 | XAB2 | ENSMFAP00000021330 | ENSMFAP00000013763 | BUD31 homolog. | XPA binding protein 2. | 0.999 |
CDC40 | BUD31 | ENSMFAP00000005369 | ENSMFAP00000021330 | Cell division cycle 40. | BUD31 homolog. | 0.982 |
CDC40 | CRNKL1 | ENSMFAP00000005369 | ENSMFAP00000042238 | Cell division cycle 40. | Crooked neck pre-mRNA splicing factor 1. | 0.986 |
CDC40 | DHX15 | ENSMFAP00000005369 | ENSMFAP00000034246 | Cell division cycle 40. | DEAH-box helicase 15. | 0.990 |
CDC40 | DQX1 | ENSMFAP00000005369 | ENSMFAP00000004370 | Cell division cycle 40. | DEAQ-box RNA dependent ATPase 1. | 0.829 |
CDC40 | EFTUD2 | ENSMFAP00000005369 | ENSMFAP00000031098 | Cell division cycle 40. | Elongation factor Tu GTP binding domain containing 2. | 0.985 |
CDC40 | PRPF8 | ENSMFAP00000005369 | ENSMFAP00000042847 | Cell division cycle 40. | Pre-mRNA processing factor 8. | 0.980 |
CDC40 | SNRPA1 | ENSMFAP00000005369 | ENSMFAP00000012116 | Cell division cycle 40. | U2 small nuclear ribonucleoprotein A; Involved in pre-mRNA splicing as component of the spliceosome. Associated with sn-RNP U2, where it contributes to the binding of stem loop IV of U2 snRNA. | 0.982 |
CDC40 | SYF2 | ENSMFAP00000005369 | ENSMFAP00000029106 | Cell division cycle 40. | SYF2 pre-mRNA splicing factor. | 0.998 |
CDC40 | TFIP11 | ENSMFAP00000005369 | ENSMFAP00000023492 | Cell division cycle 40. | Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...] | 0.963 |
CDC40 | XAB2 | ENSMFAP00000005369 | ENSMFAP00000013763 | Cell division cycle 40. | XPA binding protein 2. | 0.985 |
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