Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FAM107B | NOVA2 | ENSMFAP00000031838 | ENSMFAP00000024126 | Family with sequence similarity 107 member B. | NOVA alternative splicing regulator 2. | 0.511 |
NOVA2 | FAM107B | ENSMFAP00000024126 | ENSMFAP00000031838 | NOVA alternative splicing regulator 2. | Family with sequence similarity 107 member B. | 0.511 |
NOVA2 | PTBP2 | ENSMFAP00000024126 | ENSMFAP00000011050 | NOVA alternative splicing regulator 2. | Polypyrimidine tract binding protein 2. | 0.541 |
NOVA2 | RASSF8 | ENSMFAP00000024126 | ENSMFAP00000003781 | NOVA alternative splicing regulator 2. | Ras-associating domain-containing protein. | 0.407 |
NOVA2 | SEC31A | ENSMFAP00000024126 | ENSMFAP00000003550 | NOVA alternative splicing regulator 2. | SEC31 homolog A, COPII coat complex component. | 0.404 |
NOVA2 | SNRPB2 | ENSMFAP00000024126 | ENSMFAP00000016217 | NOVA alternative splicing regulator 2. | Small nuclear ribonucleoprotein polypeptide B2. | 0.421 |
PTBP2 | NOVA2 | ENSMFAP00000011050 | ENSMFAP00000024126 | Polypyrimidine tract binding protein 2. | NOVA alternative splicing regulator 2. | 0.541 |
PTBP2 | SNRPB2 | ENSMFAP00000011050 | ENSMFAP00000016217 | Polypyrimidine tract binding protein 2. | Small nuclear ribonucleoprotein polypeptide B2. | 0.449 |
RASSF8 | NOVA2 | ENSMFAP00000003781 | ENSMFAP00000024126 | Ras-associating domain-containing protein. | NOVA alternative splicing regulator 2. | 0.407 |
RASSF8 | SEC31A | ENSMFAP00000003781 | ENSMFAP00000003550 | Ras-associating domain-containing protein. | SEC31 homolog A, COPII coat complex component. | 0.629 |
SEC31A | NOVA2 | ENSMFAP00000003550 | ENSMFAP00000024126 | SEC31 homolog A, COPII coat complex component. | NOVA alternative splicing regulator 2. | 0.404 |
SEC31A | RASSF8 | ENSMFAP00000003550 | ENSMFAP00000003781 | SEC31 homolog A, COPII coat complex component. | Ras-associating domain-containing protein. | 0.629 |
SNRPB2 | NOVA2 | ENSMFAP00000016217 | ENSMFAP00000024126 | Small nuclear ribonucleoprotein polypeptide B2. | NOVA alternative splicing regulator 2. | 0.421 |
SNRPB2 | PTBP2 | ENSMFAP00000016217 | ENSMFAP00000011050 | Small nuclear ribonucleoprotein polypeptide B2. | Polypyrimidine tract binding protein 2. | 0.449 |