Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGRN | DAG1 | ENSMFAP00000038323 | ENSMFAP00000025795 | Agrin. | Dystroglycan 1. | 0.986 |
AGRN | DMD | ENSMFAP00000038323 | ENSMFAP00000028080 | Agrin. | Dystrophin. | 0.688 |
AGRN | HSPG2 | ENSMFAP00000038323 | ENSMFAP00000015244 | Agrin. | Heparan sulfate proteoglycan 2. | 0.643 |
AGRN | POMT1 | ENSMFAP00000038323 | ENSMFAP00000003188 | Agrin. | Protein O-mannosyltransferase 1. | 0.755 |
AGRN | UTRN | ENSMFAP00000038323 | ENSMFAP00000007967 | Agrin. | Utrophin. | 0.603 |
DAG1 | AGRN | ENSMFAP00000025795 | ENSMFAP00000038323 | Dystroglycan 1. | Agrin. | 0.986 |
DAG1 | DMD | ENSMFAP00000025795 | ENSMFAP00000028080 | Dystroglycan 1. | Dystrophin. | 0.983 |
DAG1 | EGFLAM | ENSMFAP00000025795 | ENSMFAP00000003772 | Dystroglycan 1. | EGF like, fibronectin type III and laminin G domains. | 0.890 |
DAG1 | EOGT | ENSMFAP00000025795 | ENSMFAP00000029495 | Dystroglycan 1. | EGF domain specific O-linked N-acetylglucosamine transferase. | 0.878 |
DAG1 | HSPG2 | ENSMFAP00000025795 | ENSMFAP00000015244 | Dystroglycan 1. | Heparan sulfate proteoglycan 2. | 0.983 |
DAG1 | LAMA1 | ENSMFAP00000025795 | ENSMFAP00000010458 | Dystroglycan 1. | Laminin subunit alpha 1. | 0.922 |
DAG1 | LAMA2 | ENSMFAP00000025795 | ENSMFAP00000044267 | Dystroglycan 1. | Laminin subunit alpha 2. | 0.970 |
DAG1 | POMGNT2 | ENSMFAP00000025795 | ENSMFAP00000011254 | Dystroglycan 1. | Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-). | 0.954 |
DAG1 | POMT1 | ENSMFAP00000025795 | ENSMFAP00000003188 | Dystroglycan 1. | Protein O-mannosyltransferase 1. | 0.877 |
DAG1 | UTRN | ENSMFAP00000025795 | ENSMFAP00000007967 | Dystroglycan 1. | Utrophin. | 0.883 |
DMD | AGRN | ENSMFAP00000028080 | ENSMFAP00000038323 | Dystrophin. | Agrin. | 0.688 |
DMD | DAG1 | ENSMFAP00000028080 | ENSMFAP00000025795 | Dystrophin. | Dystroglycan 1. | 0.983 |
DMD | HSPG2 | ENSMFAP00000028080 | ENSMFAP00000015244 | Dystrophin. | Heparan sulfate proteoglycan 2. | 0.418 |
DMD | LAMA2 | ENSMFAP00000028080 | ENSMFAP00000044267 | Dystrophin. | Laminin subunit alpha 2. | 0.736 |
DMD | POMT1 | ENSMFAP00000028080 | ENSMFAP00000003188 | Dystrophin. | Protein O-mannosyltransferase 1. | 0.417 |
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