STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL22A1Collagen type XXII alpha 1 chain. (1374 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
   
 0.845
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.780
ARID4B
AT-rich interaction domain 4B.
    
 0.716
COL21A1
Collagen type XXI alpha 1 chain.
  
 
0.716
ARID4A
AT-rich interaction domain 4A.
    
 0.716
CNIH3
Cornichon family AMPA receptor auxiliary protein 3.
    
 0.713
CNIH1
Uncharacterized protein.
    
 0.706
SEC16B
Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.
    
 0.701
TEP1
Telomerase associated protein 1.
    
 0.699
RIPK4
Receptor interacting serine/threonine kinase 4.
   
 0.690
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.