Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABCD3 | FAM185A | ENSMFAP00000025637 | ENSMFAP00000000418 | ATP binding cassette subfamily D member 3. | Family with sequence similarity 185 member A. | 0.595 |
ABCD3 | PEX11A | ENSMFAP00000025637 | ENSMFAP00000021695 | ATP binding cassette subfamily D member 3. | Peroxisomal biogenesis factor 11 alpha. | 0.819 |
ABCD3 | PEX11G | ENSMFAP00000025637 | ENSMFAP00000019744 | ATP binding cassette subfamily D member 3. | Peroxisomal biogenesis factor 11 gamma. | 0.580 |
ABCD3 | PEX12 | ENSMFAP00000025637 | ENSMFAP00000044239 | ATP binding cassette subfamily D member 3. | Pex2_Pex12 domain-containing protein. | 0.818 |
ABCD3 | PEX13 | ENSMFAP00000025637 | ENSMFAP00000022483 | ATP binding cassette subfamily D member 3. | Peroxisomal biogenesis factor 13. | 0.852 |
ABCD3 | PEX14 | ENSMFAP00000025637 | ENSMFAP00000018982 | ATP binding cassette subfamily D member 3. | Pex14_N domain-containing protein. | 0.796 |
ABCD3 | PEX16 | ENSMFAP00000025637 | ENSMFAP00000005359 | ATP binding cassette subfamily D member 3. | Peroxisomal membrane protein PEX16. | 0.857 |
ABCD3 | PEX19 | ENSMFAP00000025637 | ENSMFAP00000029183 | ATP binding cassette subfamily D member 3. | Peroxisomal biogenesis factor 19. | 0.937 |
ABCD3 | PEX3 | ENSMFAP00000025637 | ENSMFAP00000041258 | ATP binding cassette subfamily D member 3. | Peroxisomal biogenesis factor 3; Involved in peroxisome biosynthesis and integrity. Assembles membrane vesicles before the matrix proteins are translocated. As a docking factor for PEX19, is necessary for the import of peroxisomal membrane proteins in the peroxisomes (By similarity). | 0.881 |
CCT4 | PEX19 | ENSMFAP00000016404 | ENSMFAP00000029183 | T-complex protein 1 subunit delta. | Peroxisomal biogenesis factor 19. | 0.946 |
FAM185A | ABCD3 | ENSMFAP00000000418 | ENSMFAP00000025637 | Family with sequence similarity 185 member A. | ATP binding cassette subfamily D member 3. | 0.595 |
FAM185A | PEX11A | ENSMFAP00000000418 | ENSMFAP00000021695 | Family with sequence similarity 185 member A. | Peroxisomal biogenesis factor 11 alpha. | 0.792 |
FAM185A | PEX11G | ENSMFAP00000000418 | ENSMFAP00000019744 | Family with sequence similarity 185 member A. | Peroxisomal biogenesis factor 11 gamma. | 0.792 |
FAM185A | PEX12 | ENSMFAP00000000418 | ENSMFAP00000044239 | Family with sequence similarity 185 member A. | Pex2_Pex12 domain-containing protein. | 0.893 |
FAM185A | PEX13 | ENSMFAP00000000418 | ENSMFAP00000022483 | Family with sequence similarity 185 member A. | Peroxisomal biogenesis factor 13. | 0.972 |
FAM185A | PEX16 | ENSMFAP00000000418 | ENSMFAP00000005359 | Family with sequence similarity 185 member A. | Peroxisomal membrane protein PEX16. | 0.757 |
FAM185A | PEX19 | ENSMFAP00000000418 | ENSMFAP00000029183 | Family with sequence similarity 185 member A. | Peroxisomal biogenesis factor 19. | 0.965 |
FAM185A | PEX3 | ENSMFAP00000000418 | ENSMFAP00000041258 | Family with sequence similarity 185 member A. | Peroxisomal biogenesis factor 3; Involved in peroxisome biosynthesis and integrity. Assembles membrane vesicles before the matrix proteins are translocated. As a docking factor for PEX19, is necessary for the import of peroxisomal membrane proteins in the peroxisomes (By similarity). | 0.842 |
PEX11A | ABCD3 | ENSMFAP00000021695 | ENSMFAP00000025637 | Peroxisomal biogenesis factor 11 alpha. | ATP binding cassette subfamily D member 3. | 0.819 |
PEX11A | FAM185A | ENSMFAP00000021695 | ENSMFAP00000000418 | Peroxisomal biogenesis factor 11 alpha. | Family with sequence similarity 185 member A. | 0.792 |
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