Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FUBP3 | KHDRBS1 | ENSMFAP00000003060 | ENSMFAP00000008525 | Far upstream element binding protein 3. | KH domain-containing protein. | 0.552 |
FUBP3 | KHDRBS2 | ENSMFAP00000003060 | ENSMFAP00000032496 | Far upstream element binding protein 3. | KH RNA binding domain containing, signal transduction associated 2. | 0.554 |
FUBP3 | KHDRBS3 | ENSMFAP00000003060 | ENSMFAP00000029184 | Far upstream element binding protein 3. | KH RNA binding domain containing, signal transduction associated 3. | 0.544 |
FYN | KHDRBS1 | ENSMFAP00000000562 | ENSMFAP00000008525 | Tyrosine-protein kinase. | KH domain-containing protein. | 0.904 |
FYN | KHDRBS2 | ENSMFAP00000000562 | ENSMFAP00000032496 | Tyrosine-protein kinase. | KH RNA binding domain containing, signal transduction associated 2. | 0.548 |
FYN | KHDRBS3 | ENSMFAP00000000562 | ENSMFAP00000029184 | Tyrosine-protein kinase. | KH RNA binding domain containing, signal transduction associated 3. | 0.547 |
KHDRBS1 | FUBP3 | ENSMFAP00000008525 | ENSMFAP00000003060 | KH domain-containing protein. | Far upstream element binding protein 3. | 0.552 |
KHDRBS1 | FYN | ENSMFAP00000008525 | ENSMFAP00000000562 | KH domain-containing protein. | Tyrosine-protein kinase. | 0.904 |
KHDRBS1 | KHDRBS2 | ENSMFAP00000008525 | ENSMFAP00000032496 | KH domain-containing protein. | KH RNA binding domain containing, signal transduction associated 2. | 0.502 |
KHDRBS1 | KHDRBS3 | ENSMFAP00000008525 | ENSMFAP00000029184 | KH domain-containing protein. | KH RNA binding domain containing, signal transduction associated 3. | 0.699 |
KHDRBS1 | MED15 | ENSMFAP00000008525 | ENSMFAP00000001599 | KH domain-containing protein. | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.477 |
KHDRBS1 | MED23 | ENSMFAP00000008525 | ENSMFAP00000010926 | KH domain-containing protein. | Mediator complex subunit 23. | 0.473 |
KHDRBS1 | MED4 | ENSMFAP00000008525 | ENSMFAP00000031323 | KH domain-containing protein. | Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.499 |
KHDRBS1 | PTK6 | ENSMFAP00000008525 | ENSMFAP00000022424 | KH domain-containing protein. | Tyrosine-protein kinase. | 0.874 |
KHDRBS1 | SRMS | ENSMFAP00000008525 | ENSMFAP00000002345 | KH domain-containing protein. | Tyrosine-protein kinase. | 0.736 |
KHDRBS2 | FUBP3 | ENSMFAP00000032496 | ENSMFAP00000003060 | KH RNA binding domain containing, signal transduction associated 2. | Far upstream element binding protein 3. | 0.554 |
KHDRBS2 | FYN | ENSMFAP00000032496 | ENSMFAP00000000562 | KH RNA binding domain containing, signal transduction associated 2. | Tyrosine-protein kinase. | 0.548 |
KHDRBS2 | KHDRBS1 | ENSMFAP00000032496 | ENSMFAP00000008525 | KH RNA binding domain containing, signal transduction associated 2. | KH domain-containing protein. | 0.502 |
KHDRBS2 | KHDRBS3 | ENSMFAP00000032496 | ENSMFAP00000029184 | KH RNA binding domain containing, signal transduction associated 2. | KH RNA binding domain containing, signal transduction associated 3. | 0.640 |
KHDRBS2 | MED15 | ENSMFAP00000032496 | ENSMFAP00000001599 | KH RNA binding domain containing, signal transduction associated 2. | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.477 |
page 1 of 3