Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NKX2-1 | SFTA3 | ENSMFAP00000040421 | ENSMFAP00000030339 | NK2 homeobox 1. | Surfactant associated 3. | 0.601 |
NKX2-1 | SFTPB | ENSMFAP00000040421 | ENSMFAP00000044692 | NK2 homeobox 1. | Surfactant protein B. | 0.636 |
NKX2-4 | SFTA3 | ENSMFAP00000025968 | ENSMFAP00000030339 | NK2 homeobox 4. | Surfactant associated 3. | 0.536 |
NKX2-4 | SFTPB | ENSMFAP00000025968 | ENSMFAP00000044692 | NK2 homeobox 4. | Surfactant protein B. | 0.485 |
SFTA2 | SFTA3 | ENSMFAP00000016165 | ENSMFAP00000030339 | Surfactant associated 2. | Surfactant associated 3. | 0.417 |
SFTA3 | NKX2-1 | ENSMFAP00000030339 | ENSMFAP00000040421 | Surfactant associated 3. | NK2 homeobox 1. | 0.601 |
SFTA3 | NKX2-4 | ENSMFAP00000030339 | ENSMFAP00000025968 | Surfactant associated 3. | NK2 homeobox 4. | 0.536 |
SFTA3 | SFTA2 | ENSMFAP00000030339 | ENSMFAP00000016165 | Surfactant associated 3. | Surfactant associated 2. | 0.417 |
SFTA3 | SFTPB | ENSMFAP00000030339 | ENSMFAP00000044692 | Surfactant associated 3. | Surfactant protein B. | 0.428 |
SFTPB | NKX2-1 | ENSMFAP00000044692 | ENSMFAP00000040421 | Surfactant protein B. | NK2 homeobox 1. | 0.636 |
SFTPB | NKX2-4 | ENSMFAP00000044692 | ENSMFAP00000025968 | Surfactant protein B. | NK2 homeobox 4. | 0.485 |
SFTPB | SFTA3 | ENSMFAP00000044692 | ENSMFAP00000030339 | Surfactant protein B. | Surfactant associated 3. | 0.428 |