Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C6orf52 | ENSMFAP00000001201 | ENSMFAP00000018920 | ENSMFAP00000001201 | Chromosome 6 open reading frame 52. | Uncharacterized protein. | 0.527 |
C6orf52 | G3BP1 | ENSMFAP00000018920 | ENSMFAP00000031831 | Chromosome 6 open reading frame 52. | G3BP stress granule assembly factor 1. | 0.527 |
C6orf52 | G3BP2 | ENSMFAP00000018920 | ENSMFAP00000026656 | Chromosome 6 open reading frame 52. | G3BP stress granule assembly factor 2. | 0.527 |
C6orf52 | USP10 | ENSMFAP00000018920 | ENSMFAP00000033288 | Chromosome 6 open reading frame 52. | Ubiquitin specific peptidase 10; Belongs to the peptidase C19 family. | 0.743 |
CAPRIN1 | ENSMFAP00000001201 | ENSMFAP00000000336 | ENSMFAP00000001201 | Cell cycle associated protein 1. | Uncharacterized protein. | 0.927 |
CAPRIN1 | G3BP1 | ENSMFAP00000000336 | ENSMFAP00000031831 | Cell cycle associated protein 1. | G3BP stress granule assembly factor 1. | 0.961 |
CAPRIN1 | G3BP2 | ENSMFAP00000000336 | ENSMFAP00000026656 | Cell cycle associated protein 1. | G3BP stress granule assembly factor 2. | 0.926 |
CAPRIN1 | USP10 | ENSMFAP00000000336 | ENSMFAP00000033288 | Cell cycle associated protein 1. | Ubiquitin specific peptidase 10; Belongs to the peptidase C19 family. | 0.693 |
CFTR | USP10 | ENSMFAP00000007238 | ENSMFAP00000033288 | Cystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane (By similarity). Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelia [...] | Ubiquitin specific peptidase 10; Belongs to the peptidase C19 family. | 0.831 |
ENSMFAP00000001201 | C6orf52 | ENSMFAP00000001201 | ENSMFAP00000018920 | Uncharacterized protein. | Chromosome 6 open reading frame 52. | 0.527 |
ENSMFAP00000001201 | CAPRIN1 | ENSMFAP00000001201 | ENSMFAP00000000336 | Uncharacterized protein. | Cell cycle associated protein 1. | 0.927 |
ENSMFAP00000001201 | G3BP2 | ENSMFAP00000001201 | ENSMFAP00000026656 | Uncharacterized protein. | G3BP stress granule assembly factor 2. | 0.738 |
ENSMFAP00000001201 | TRNAU1AP | ENSMFAP00000001201 | ENSMFAP00000024313 | Uncharacterized protein. | tRNA selenocysteine 1 associated protein 1. | 0.527 |
ENSMFAP00000001201 | USP10 | ENSMFAP00000001201 | ENSMFAP00000033288 | Uncharacterized protein. | Ubiquitin specific peptidase 10; Belongs to the peptidase C19 family. | 0.882 |
G3BP1 | C6orf52 | ENSMFAP00000031831 | ENSMFAP00000018920 | G3BP stress granule assembly factor 1. | Chromosome 6 open reading frame 52. | 0.527 |
G3BP1 | CAPRIN1 | ENSMFAP00000031831 | ENSMFAP00000000336 | G3BP stress granule assembly factor 1. | Cell cycle associated protein 1. | 0.961 |
G3BP1 | G3BP2 | ENSMFAP00000031831 | ENSMFAP00000026656 | G3BP stress granule assembly factor 1. | G3BP stress granule assembly factor 2. | 0.736 |
G3BP1 | TRNAU1AP | ENSMFAP00000031831 | ENSMFAP00000024313 | G3BP stress granule assembly factor 1. | tRNA selenocysteine 1 associated protein 1. | 0.527 |
G3BP1 | USP10 | ENSMFAP00000031831 | ENSMFAP00000033288 | G3BP stress granule assembly factor 1. | Ubiquitin specific peptidase 10; Belongs to the peptidase C19 family. | 0.882 |
G3BP2 | C6orf52 | ENSMFAP00000026656 | ENSMFAP00000018920 | G3BP stress granule assembly factor 2. | Chromosome 6 open reading frame 52. | 0.527 |
page 1 of 3