Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FOXD4L1 | IRX1 | ENSMFAP00000034192 | ENSMFAP00000004552 | Forkhead box D4 like 1. | Iroquois homeobox 1. | 0.623 |
FOXD4L1 | SIX1 | ENSMFAP00000034192 | ENSMFAP00000019338 | Forkhead box D4 like 1. | SIX homeobox 1. | 0.611 |
FOXD4L1 | SMAD4 | ENSMFAP00000034192 | ENSMFAP00000032134 | Forkhead box D4 like 1. | Mothers against decapentaplegic homolog. | 0.416 |
FOXD4L1 | SOX11 | ENSMFAP00000034192 | ENSMFAP00000011949 | Forkhead box D4 like 1. | Transcription factor SOX. | 0.404 |
FOXD4L1 | ZIC2 | ENSMFAP00000034192 | ENSMFAP00000037039 | Forkhead box D4 like 1. | Zic family member 2. | 0.579 |
IRX1 | FOXD4L1 | ENSMFAP00000004552 | ENSMFAP00000034192 | Iroquois homeobox 1. | Forkhead box D4 like 1. | 0.623 |
SIX1 | FOXD4L1 | ENSMFAP00000019338 | ENSMFAP00000034192 | SIX homeobox 1. | Forkhead box D4 like 1. | 0.611 |
SMAD4 | FOXD4L1 | ENSMFAP00000032134 | ENSMFAP00000034192 | Mothers against decapentaplegic homolog. | Forkhead box D4 like 1. | 0.416 |
SOX11 | FOXD4L1 | ENSMFAP00000011949 | ENSMFAP00000034192 | Transcription factor SOX. | Forkhead box D4 like 1. | 0.404 |
ZIC2 | FOXD4L1 | ENSMFAP00000037039 | ENSMFAP00000034192 | Zic family member 2. | Forkhead box D4 like 1. | 0.579 |