Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BARD1 | ENSMFAP00000009791 | ENSMFAP00000019203 | ENSMFAP00000009791 | BRCA1 associated RING domain 1. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.709 |
BARD1 | HHLA1 | ENSMFAP00000019203 | ENSMFAP00000034761 | BRCA1 associated RING domain 1. | HERV-H LTR-associating 1. | 0.473 |
ENSMFAP00000009791 | BARD1 | ENSMFAP00000009791 | ENSMFAP00000019203 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | BRCA1 associated RING domain 1. | 0.709 |
ENSMFAP00000009791 | HHLA1 | ENSMFAP00000009791 | ENSMFAP00000034761 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | HERV-H LTR-associating 1. | 0.427 |
HHLA1 | BARD1 | ENSMFAP00000034761 | ENSMFAP00000019203 | HERV-H LTR-associating 1. | BRCA1 associated RING domain 1. | 0.473 |
HHLA1 | ENSMFAP00000009791 | ENSMFAP00000034761 | ENSMFAP00000009791 | HERV-H LTR-associating 1. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.427 |
HHLA1 | OC90 | ENSMFAP00000034761 | ENSMFAP00000032089 | HERV-H LTR-associating 1. | Uncharacterized protein. | 0.718 |
HHLA1 | ZNF521 | ENSMFAP00000034761 | ENSMFAP00000026380 | HERV-H LTR-associating 1. | Zinc finger protein 521. | 0.436 |
OC90 | HHLA1 | ENSMFAP00000032089 | ENSMFAP00000034761 | Uncharacterized protein. | HERV-H LTR-associating 1. | 0.718 |
ZNF521 | HHLA1 | ENSMFAP00000026380 | ENSMFAP00000034761 | Zinc finger protein 521. | HERV-H LTR-associating 1. | 0.436 |