Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARSA | ARSB | ENSMFAP00000041403 | ENSMFAP00000035229 | Arylsulfatase A. | Arylsulfatase B. | 0.952 |
ARSA | ARSG | ENSMFAP00000041403 | ENSMFAP00000011803 | Arylsulfatase A. | Arylsulfatase G. | 0.949 |
ARSA | ARSK | ENSMFAP00000041403 | ENSMFAP00000021425 | Arylsulfatase A. | Arylsulfatase family member K. | 0.557 |
ARSA | IDUA | ENSMFAP00000041403 | ENSMFAP00000017855 | Arylsulfatase A. | Iduronidase alpha-L-. | 0.553 |
ARSA | SUMF1 | ENSMFAP00000041403 | ENSMFAP00000039244 | Arylsulfatase A. | Sulfatase modifying factor 1. | 0.870 |
ARSB | ARSA | ENSMFAP00000035229 | ENSMFAP00000041403 | Arylsulfatase B. | Arylsulfatase A. | 0.952 |
ARSB | ARSG | ENSMFAP00000035229 | ENSMFAP00000011803 | Arylsulfatase B. | Arylsulfatase G. | 0.953 |
ARSB | ARSK | ENSMFAP00000035229 | ENSMFAP00000021425 | Arylsulfatase B. | Arylsulfatase family member K. | 0.701 |
ARSB | HYAL1 | ENSMFAP00000035229 | ENSMFAP00000032954 | Arylsulfatase B. | Hyaluronidase. | 0.912 |
ARSB | HYAL2 | ENSMFAP00000035229 | ENSMFAP00000046116 | Arylsulfatase B. | Hyaluronidase. | 0.912 |
ARSB | HYAL3 | ENSMFAP00000035229 | ENSMFAP00000024018 | Arylsulfatase B. | Hyaluronidase-3; Facilitates sperm penetration into the layer of cumulus cells surrounding the egg by digesting hyaluronic acid. Involved in induction of the acrosome reaction in the sperm. Involved in follicular atresia, the breakdown of immature ovarian follicles that are not selected to ovulate. Induces ovarian granulosa cell apoptosis, possibly via apoptotic signaling pathway involving CASP8 and CASP3 activation, and poly(ADP-ribose) polymerase (PARP) cleavage. Belongs to the glycosyl hydrolase 56 family. | 0.906 |
ARSB | HYAL4 | ENSMFAP00000035229 | ENSMFAP00000030443 | Arylsulfatase B. | Hyaluronidase. | 0.906 |
ARSB | IDUA | ENSMFAP00000035229 | ENSMFAP00000017855 | Arylsulfatase B. | Iduronidase alpha-L-. | 0.952 |
ARSB | SPAM1 | ENSMFAP00000035229 | ENSMFAP00000006823 | Arylsulfatase B. | Hyaluronidase PH-20; Involved in sperm-egg adhesion. Upon fertilization sperm must first penetrate a layer of cumulus cells that surrounds the egg before reaching the zona pellucida. The cumulus cells are embedded in a matrix containing hyaluronic acid which is formed prior to ovulation. This protein aids in penetrating the layer of cumulus cells by digesting hyaluronic acid. | 0.912 |
ARSB | SUMF1 | ENSMFAP00000035229 | ENSMFAP00000039244 | Arylsulfatase B. | Sulfatase modifying factor 1. | 0.775 |
ARSG | ARSA | ENSMFAP00000011803 | ENSMFAP00000041403 | Arylsulfatase G. | Arylsulfatase A. | 0.949 |
ARSG | ARSB | ENSMFAP00000011803 | ENSMFAP00000035229 | Arylsulfatase G. | Arylsulfatase B. | 0.953 |
ARSG | ARSK | ENSMFAP00000011803 | ENSMFAP00000021425 | Arylsulfatase G. | Arylsulfatase family member K. | 0.693 |
ARSG | IDUA | ENSMFAP00000011803 | ENSMFAP00000017855 | Arylsulfatase G. | Iduronidase alpha-L-. | 0.645 |
ARSG | SUMF1 | ENSMFAP00000011803 | ENSMFAP00000039244 | Arylsulfatase G. | Sulfatase modifying factor 1. | 0.808 |
page 1 of 3