STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMFAP00000035418RRM domain-containing protein. (266 aa)    
Predicted Functional Partners:
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.603
SRSF11
Serine and arginine rich splicing factor 11.
   
 0.588
PTBP2
Polypyrimidine tract binding protein 2.
   
 0.572
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.570
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
 0.569
HNRNPA2B1
Uncharacterized protein.
   
 0.560
SRSF10
RRM domain-containing protein.
   
 0.559
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
 0.556
HNRNPL
Uncharacterized protein.
   
 0.555
HNRNPF
Heterogeneous nuclear ribonucleoprotein F, N-terminally processed; Component of the heterogeneous nuclear ribonucleoprotein (hnRNP) complexes which provide the substrate for the processing events that pre-mRNAs undergo before becoming functional, translatable mRNAs in the cytoplasm. Plays a role in the regulation of alternative splicing events. Binds G-rich sequences in pre-mRNAs and keeps target RNA in an unfolded state (By similarity).
  
0.541
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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