Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATXN3 | ATXN7 | ENSMFAP00000025988 | ENSMFAP00000036822 | Josephin domain-containing protein. | SCA7 domain-containing protein. | 0.782 |
ATXN3 | KCNN3 | ENSMFAP00000025988 | ENSMFAP00000042752 | Josephin domain-containing protein. | Potassium calcium-activated channel subfamily N member 3. | 0.726 |
ATXN3 | KMT2D | ENSMFAP00000025988 | ENSMFAP00000038731 | Josephin domain-containing protein. | Lysine methyltransferase 2D. | 0.719 |
ATXN3 | MED12 | ENSMFAP00000025988 | ENSMFAP00000019480 | Josephin domain-containing protein. | Mediator complex subunit 12. | 0.685 |
ATXN3 | PAXIP1 | ENSMFAP00000025988 | ENSMFAP00000001286 | Josephin domain-containing protein. | PAX interacting protein 1. | 0.723 |
ATXN3 | RUNX2 | ENSMFAP00000025988 | ENSMFAP00000035682 | Josephin domain-containing protein. | RUNX family transcription factor 2. | 0.520 |
ATXN3 | ZFHX3 | ENSMFAP00000025988 | ENSMFAP00000035674 | Josephin domain-containing protein. | Zinc finger homeobox 3. | 0.762 |
ATXN7 | ATXN3 | ENSMFAP00000036822 | ENSMFAP00000025988 | SCA7 domain-containing protein. | Josephin domain-containing protein. | 0.782 |
ATXN7 | KCNN3 | ENSMFAP00000036822 | ENSMFAP00000042752 | SCA7 domain-containing protein. | Potassium calcium-activated channel subfamily N member 3. | 0.884 |
ATXN7 | KMT2D | ENSMFAP00000036822 | ENSMFAP00000038731 | SCA7 domain-containing protein. | Lysine methyltransferase 2D. | 0.872 |
ATXN7 | MED12 | ENSMFAP00000036822 | ENSMFAP00000019480 | SCA7 domain-containing protein. | Mediator complex subunit 12. | 0.803 |
ATXN7 | PAXIP1 | ENSMFAP00000036822 | ENSMFAP00000001286 | SCA7 domain-containing protein. | PAX interacting protein 1. | 0.844 |
ATXN7 | RUNX1 | ENSMFAP00000036822 | ENSMFAP00000019622 | SCA7 domain-containing protein. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.517 |
ATXN7 | RUNX2 | ENSMFAP00000036822 | ENSMFAP00000035682 | SCA7 domain-containing protein. | RUNX family transcription factor 2. | 0.708 |
ATXN7 | TBP | ENSMFAP00000036822 | ENSMFAP00000015908 | SCA7 domain-containing protein. | TATA-box-binding protein; General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre-initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II. Component of a BRF2-containing transcription factor complex that regulates transcription mediated by RNA polymerase III. Component of the transcription factor SL1/TIF-IB complex, which is involved in the assembly of the PIC (pre-initiation complex) during RNA polymerase [...] | 0.816 |
ATXN7 | ZFHX3 | ENSMFAP00000036822 | ENSMFAP00000035674 | SCA7 domain-containing protein. | Zinc finger homeobox 3. | 0.928 |
KCNN3 | ATXN3 | ENSMFAP00000042752 | ENSMFAP00000025988 | Potassium calcium-activated channel subfamily N member 3. | Josephin domain-containing protein. | 0.726 |
KCNN3 | ATXN7 | ENSMFAP00000042752 | ENSMFAP00000036822 | Potassium calcium-activated channel subfamily N member 3. | SCA7 domain-containing protein. | 0.884 |
KCNN3 | KMT2D | ENSMFAP00000042752 | ENSMFAP00000038731 | Potassium calcium-activated channel subfamily N member 3. | Lysine methyltransferase 2D. | 0.879 |
KCNN3 | MED12 | ENSMFAP00000042752 | ENSMFAP00000019480 | Potassium calcium-activated channel subfamily N member 3. | Mediator complex subunit 12. | 0.854 |
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