Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGRN | NCAM1 | ENSMFAP00000038323 | ENSMFAP00000027722 | Agrin. | Neural cell adhesion molecule 1. | 0.626 |
AGRN | NCAM2 | ENSMFAP00000038323 | ENSMFAP00000040900 | Agrin. | Neural cell adhesion molecule 2. | 0.586 |
AGRN | VCAN | ENSMFAP00000038323 | ENSMFAP00000019358 | Agrin. | Versican. | 0.438 |
CNTN2 | L1CAM | ENSMFAP00000038095 | ENSMFAP00000014926 | Contactin 2. | L1 cell adhesion molecule. | 0.986 |
CNTN2 | NCAM1 | ENSMFAP00000038095 | ENSMFAP00000027722 | Contactin 2. | Neural cell adhesion molecule 1. | 0.663 |
CNTN2 | NCAM2 | ENSMFAP00000038095 | ENSMFAP00000040900 | Contactin 2. | Neural cell adhesion molecule 2. | 0.633 |
CNTN2 | ST8SIA4 | ENSMFAP00000038095 | ENSMFAP00000020400 | Contactin 2. | ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4; Belongs to the glycosyltransferase 29 family. | 0.430 |
FEZ1 | NCAM2 | ENSMFAP00000004776 | ENSMFAP00000040900 | Uncharacterized protein. | Neural cell adhesion molecule 2. | 0.625 |
GFRA1 | NCAM1 | ENSMFAP00000004495 | ENSMFAP00000027722 | GDNF family receptor alpha-1; Receptor for GDNF. Mediates the GDNF-induced autophosphorylation and activation of the RET receptor. Belongs to the GDNFR family. | Neural cell adhesion molecule 1. | 0.804 |
GFRA1 | NCAM2 | ENSMFAP00000004495 | ENSMFAP00000040900 | GDNF family receptor alpha-1; Receptor for GDNF. Mediates the GDNF-induced autophosphorylation and activation of the RET receptor. Belongs to the GDNFR family. | Neural cell adhesion molecule 2. | 0.639 |
L1CAM | CNTN2 | ENSMFAP00000014926 | ENSMFAP00000038095 | L1 cell adhesion molecule. | Contactin 2. | 0.986 |
L1CAM | NCAM1 | ENSMFAP00000014926 | ENSMFAP00000027722 | L1 cell adhesion molecule. | Neural cell adhesion molecule 1. | 0.981 |
L1CAM | NCAM2 | ENSMFAP00000014926 | ENSMFAP00000040900 | L1 cell adhesion molecule. | Neural cell adhesion molecule 2. | 0.948 |
NCAM1 | AGRN | ENSMFAP00000027722 | ENSMFAP00000038323 | Neural cell adhesion molecule 1. | Agrin. | 0.626 |
NCAM1 | CNTN2 | ENSMFAP00000027722 | ENSMFAP00000038095 | Neural cell adhesion molecule 1. | Contactin 2. | 0.663 |
NCAM1 | GFRA1 | ENSMFAP00000027722 | ENSMFAP00000004495 | Neural cell adhesion molecule 1. | GDNF family receptor alpha-1; Receptor for GDNF. Mediates the GDNF-induced autophosphorylation and activation of the RET receptor. Belongs to the GDNFR family. | 0.804 |
NCAM1 | L1CAM | ENSMFAP00000027722 | ENSMFAP00000014926 | Neural cell adhesion molecule 1. | L1 cell adhesion molecule. | 0.981 |
NCAM1 | NCAM2 | ENSMFAP00000027722 | ENSMFAP00000040900 | Neural cell adhesion molecule 1. | Neural cell adhesion molecule 2. | 0.900 |
NCAM1 | PRNP | ENSMFAP00000027722 | ENSMFAP00000009807 | Neural cell adhesion molecule 1. | Major prion protein; Its primary physiological function is unclear. Has cytoprotective activity against internal or environmental stresses. May play a role in neuronal development and synaptic plasticity. May be required for neuronal myelin sheath maintenance. May play a role in iron uptake and iron homeostasis. Soluble oligomers are toxic to cultured neuroblastoma cells and induce apoptosis (in vitro). Association with GPC1 (via its heparan sulfate chains) targets PRNP to lipid rafts. Also provides Cu(2+) or ZN(2+) for the ascorbate-mediated GPC1 deaminase degradation of its heparan s [...] | 0.990 |
NCAM1 | ST8SIA2 | ENSMFAP00000027722 | ENSMFAP00000008299 | Neural cell adhesion molecule 1. | ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2; Belongs to the glycosyltransferase 29 family. | 0.776 |
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