Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDX46 | ENSMFAP00000043141 | ENSMFAP00000026440 | ENSMFAP00000043141 | DEAD-box helicase 46. | Tudor domain-containing protein. | 0.769 |
DDX46 | PHF5A | ENSMFAP00000026440 | ENSMFAP00000033229 | DEAD-box helicase 46. | PHD finger protein 5A. | 0.995 |
DDX46 | PRPF6 | ENSMFAP00000026440 | ENSMFAP00000002296 | DEAD-box helicase 46. | Pre-mRNA processing factor 6. | 0.755 |
DDX46 | PUF60 | ENSMFAP00000026440 | ENSMFAP00000023680 | DEAD-box helicase 46. | Poly(U) binding splicing factor 60. | 0.932 |
DDX46 | RBM17 | ENSMFAP00000026440 | ENSMFAP00000021293 | DEAD-box helicase 46. | RNA binding motif protein 17. | 0.940 |
DDX46 | SF3A2 | ENSMFAP00000026440 | ENSMFAP00000005976 | DEAD-box helicase 46. | Splicing factor 3a subunit 2. | 0.987 |
DDX46 | SF3B6 | ENSMFAP00000026440 | ENSMFAP00000031110 | DEAD-box helicase 46. | Splicing factor 3b subunit 6. | 0.864 |
DDX46 | SNRPA | ENSMFAP00000026440 | ENSMFAP00000028871 | DEAD-box helicase 46. | Small nuclear ribonucleoprotein polypeptide A. | 0.894 |
DDX46 | SNRPA1 | ENSMFAP00000026440 | ENSMFAP00000012116 | DEAD-box helicase 46. | U2 small nuclear ribonucleoprotein A; Involved in pre-mRNA splicing as component of the spliceosome. Associated with sn-RNP U2, where it contributes to the binding of stem loop IV of U2 snRNA. | 0.993 |
DDX46 | U2SURP | ENSMFAP00000026440 | ENSMFAP00000015843 | DEAD-box helicase 46. | U2 snRNP associated SURP domain containing. | 0.959 |
ENSMFAP00000043141 | DDX46 | ENSMFAP00000043141 | ENSMFAP00000026440 | Tudor domain-containing protein. | DEAD-box helicase 46. | 0.769 |
ENSMFAP00000043141 | PHF5A | ENSMFAP00000043141 | ENSMFAP00000033229 | Tudor domain-containing protein. | PHD finger protein 5A. | 0.773 |
ENSMFAP00000043141 | PRPF6 | ENSMFAP00000043141 | ENSMFAP00000002296 | Tudor domain-containing protein. | Pre-mRNA processing factor 6. | 0.852 |
ENSMFAP00000043141 | PUF60 | ENSMFAP00000043141 | ENSMFAP00000023680 | Tudor domain-containing protein. | Poly(U) binding splicing factor 60. | 0.723 |
ENSMFAP00000043141 | RBM17 | ENSMFAP00000043141 | ENSMFAP00000021293 | Tudor domain-containing protein. | RNA binding motif protein 17. | 0.728 |
ENSMFAP00000043141 | SF3A2 | ENSMFAP00000043141 | ENSMFAP00000005976 | Tudor domain-containing protein. | Splicing factor 3a subunit 2. | 0.691 |
ENSMFAP00000043141 | SF3B6 | ENSMFAP00000043141 | ENSMFAP00000031110 | Tudor domain-containing protein. | Splicing factor 3b subunit 6. | 0.737 |
ENSMFAP00000043141 | SNRPA | ENSMFAP00000043141 | ENSMFAP00000028871 | Tudor domain-containing protein. | Small nuclear ribonucleoprotein polypeptide A. | 0.739 |
ENSMFAP00000043141 | SNRPA1 | ENSMFAP00000043141 | ENSMFAP00000012116 | Tudor domain-containing protein. | U2 small nuclear ribonucleoprotein A; Involved in pre-mRNA splicing as component of the spliceosome. Associated with sn-RNP U2, where it contributes to the binding of stem loop IV of U2 snRNA. | 0.792 |
ENSMFAP00000043141 | U2SURP | ENSMFAP00000043141 | ENSMFAP00000015843 | Tudor domain-containing protein. | U2 snRNP associated SURP domain containing. | 0.704 |
page 1 of 6