TNXB protein (Macaca mulatta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

TNXB

Uncharacterized protein. (4486 aa)

Predicted Functional Partners:

ITGA9

0.920

ITGB3

0.916

ITGA8

0.915

ITGB6

0.914

ITGAV

0.913

ITGB1

0.909

SDC4

0.905

SDC1

0.902

STK19

0.845

ITGA4

0.703

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ITGA4	ITGA8	ENSMMUP00000000407	ENSMMUP00000076931	Integrin subunit alpha 4; Belongs to the integrin alpha chain family.	Integrin subunit alpha 8; Belongs to the integrin alpha chain family.	0.822
ITGA4	ITGAV	ENSMMUP00000000407	ENSMMUP00000025579	Integrin subunit alpha 4; Belongs to the integrin alpha chain family.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.865
ITGA4	ITGB1	ENSMMUP00000000407	ENSMMUP00000023374	Integrin subunit alpha 4; Belongs to the integrin alpha chain family.	Integrin beta; Belongs to the integrin beta chain family.	0.999
ITGA4	ITGB3	ENSMMUP00000000407	ENSMMUP00000004380	Integrin subunit alpha 4; Belongs to the integrin alpha chain family.	Integrin beta; Belongs to the integrin beta chain family.	0.912
ITGA4	ITGB6	ENSMMUP00000000407	ENSMMUP00000053563	Integrin subunit alpha 4; Belongs to the integrin alpha chain family.	Integrin beta; Belongs to the integrin beta chain family.	0.924
ITGA4	TNXB	ENSMMUP00000000407	ENSMMUP00000001024	Integrin subunit alpha 4; Belongs to the integrin alpha chain family.	Uncharacterized protein.	0.703
ITGA8	ITGA4	ENSMMUP00000076931	ENSMMUP00000000407	Integrin subunit alpha 8; Belongs to the integrin alpha chain family.	Integrin subunit alpha 4; Belongs to the integrin alpha chain family.	0.822
ITGA8	ITGA9	ENSMMUP00000076931	ENSMMUP00000076948	Integrin subunit alpha 8; Belongs to the integrin alpha chain family.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.770
ITGA8	ITGAV	ENSMMUP00000076931	ENSMMUP00000025579	Integrin subunit alpha 8; Belongs to the integrin alpha chain family.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.737
ITGA8	ITGB1	ENSMMUP00000076931	ENSMMUP00000023374	Integrin subunit alpha 8; Belongs to the integrin alpha chain family.	Integrin beta; Belongs to the integrin beta chain family.	0.997
ITGA8	ITGB3	ENSMMUP00000076931	ENSMMUP00000004380	Integrin subunit alpha 8; Belongs to the integrin alpha chain family.	Integrin beta; Belongs to the integrin beta chain family.	0.996
ITGA8	ITGB6	ENSMMUP00000076931	ENSMMUP00000053563	Integrin subunit alpha 8; Belongs to the integrin alpha chain family.	Integrin beta; Belongs to the integrin beta chain family.	0.920
ITGA8	TNXB	ENSMMUP00000076931	ENSMMUP00000001024	Integrin subunit alpha 8; Belongs to the integrin alpha chain family.	Uncharacterized protein.	0.915
ITGA9	ITGA8	ENSMMUP00000076948	ENSMMUP00000076931	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Integrin subunit alpha 8; Belongs to the integrin alpha chain family.	0.770
ITGA9	ITGAV	ENSMMUP00000076948	ENSMMUP00000025579	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.677
ITGA9	ITGB1	ENSMMUP00000076948	ENSMMUP00000023374	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Integrin beta; Belongs to the integrin beta chain family.	0.997
ITGA9	ITGB3	ENSMMUP00000076948	ENSMMUP00000004380	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Integrin beta; Belongs to the integrin beta chain family.	0.847
ITGA9	ITGB6	ENSMMUP00000076948	ENSMMUP00000053563	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Integrin beta; Belongs to the integrin beta chain family.	0.864
ITGA9	TNXB	ENSMMUP00000076948	ENSMMUP00000001024	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Uncharacterized protein.	0.920
ITGAV	ITGA4	ENSMMUP00000025579	ENSMMUP00000000407	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	Integrin subunit alpha 4; Belongs to the integrin alpha chain family.	0.865