Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZMAT4Zinc finger matrin-type 4. (272 aa)    
Predicted Functional Partners:
DENND5B
DENN domain containing 5B.
   
  
 0.841
SLC24A3
Solute carrier family 24 member 3; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.797
USHBP1
USH1 protein network component harmonin binding protein 1.
      
 0.716
ITFG1
Integrin alpha FG-GAP repeat containing 1.
      
 0.707
SHC3
Uncharacterized protein.
      
 0.681
NSG2
Neuronal vesicle trafficking associated 2.
      
 0.663
CPNE7
Copine 7.
   
  
 0.613
HECW1
E3 ubiquitin-protein ligase HECW1.
   
 
 0.609
LRRC7
Leucine rich repeat containing 7.
      
 0.608
ANKRD6
ANK_REP_REGION domain-containing protein.
      
 0.602
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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