STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPC1L1SSD domain-containing protein. (1363 aa)    
Predicted Functional Partners:
NPC2
NPC intracellular cholesterol transporter 2.
   
 0.932
ABCG5
ATP binding cassette subfamily G member 5.
   
 
 0.879
ABCG8
ATP binding cassette subfamily G member 8.
   
 
 0.861
SREBF1
Sterol regulatory element binding transcription factor 1.
   
 0.818
CLDN1
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.809
SREBF2
Sterol regulatory element binding transcription factor 2.
   
 0.807
PAK1IP1
PAK1 interacting protein 1.
      
 0.778
ABCA1
ATP binding cassette subfamily A member 1.
   
 
 0.768
HMGCR
3-hydroxy-3-methylglutaryl coenzyme A reductase.
   
  
 0.765
EPHA2
EPH receptor A2.
      
 0.760
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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