Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL1Uncharacterized protein. (254 aa)    
Predicted Functional Partners:
LRCH2
Leucine rich repeats and calponin homology domain containing 2.
      
 0.896
RTL4
CCHC-type domain-containing protein.
      
 0.834
ALG13
ALG13 UDP-N-acetylglucosaminyltransferase subunit.
      
 0.788
AMOT
Angiomotin.
   
  
 0.778
HTR2C
5-hydroxytryptamine receptor 2C.
      
 0.613
TRPC5
Transient receptor potential cation channel subfamily C member 5; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.580
ENO3
Enolase 3.
      
 0.560
CYTL1
Cytokine-like protein 1.
      
 0.506
EFHC2
EF-hand domain containing 2.
   
  
 0.428
YIPF6
Protein YIPF.
      
 0.410
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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