STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRTProtein tyrosine phosphatase receptor type T. (1460 aa)    
Predicted Functional Partners:
SLC6A6
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
   
  
 0.644
SKAP2
Src kinase-associated phosphoprotein 2.
   
 
 0.590
MYO3B
Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  
 0.561
PTK7
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.528
ROR1
Receptor tyrosine kinase like orphan receptor 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. ROR subfamily.
    
 0.471
ROR2
Receptor tyrosine kinase like orphan receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. ROR subfamily.
    
 0.471
GRB2
Growth factor receptor-bound protein 2 isoform 1.
   
 0.467
CDH12
Cadherin 12; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.465
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
  0.449
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
  0.449
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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