STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDE1APhosphodiesterase. (570 aa)    
Predicted Functional Partners:
PDE1B
Phosphodiesterase.
  
  
0.964
CALML3
Calmodulin-related protein NB-1; Belongs to the calmodulin family.
    
 0.962
CALML5
Calmodulin-like protein 5.
    
 0.961
CALM3
Calmodulin 3; Belongs to the calmodulin family.
    
 0.961
CALML6
Calmodulin like 6.
    
 0.958
CALM2
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.953
PDE1C
Phosphodiesterase.
  
 
0.949
GNAT3
G protein subunit alpha transducin 3.
     
 0.919
ENPP3
Ectonucleotide pyrophosphatase/phosphodiesterase 3.
   
 
 0.913
ENPP1
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
     
 0.913
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.