Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F13A1Coagulation factor XIII A chain. (749 aa)    
Predicted Functional Partners:
F13B
Coagulation factor XIII B chain.
    
 0.999
F2
Coagulation factor II, thrombin; Belongs to the peptidase S1 family.
    
 0.985
FGA
Fibrinogen alpha chain.
   
 0.863
HSPB1
Heat shock protein beta-1; Belongs to the small heat shock protein (HSP20) family.
    
   0.716
LYVE1
Lymphatic vessel endothelial hyaluronan receptor 1.
   
 
 0.699
MRC1
Uncharacterized protein.
   
 0.661
CLEC10A
C-type lectin domain containing 10A.
   
 0.640
SERPIND1
Serpin family D member 1; Belongs to the serpin family.
     
 0.614
FGG
Fibrinogen gamma chain.
   
 0.612
FOLR1
Folate receptor alpha.
   
  
 0.598
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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