Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TSPAN11Tetraspanin. (253 aa)    
Predicted Functional Partners:
ITGA3
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
    
 0.812
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.735
ITGB4
Integrin beta.
   
 0.716
ITGA6
Integrin alpha-6 isoform a; Belongs to the integrin alpha chain family.
    
 0.669
SH2D3C
SH2 domain containing 3C.
   
  
 0.667
GRAMD1C
GRAM domain containing 1C.
    
   0.665
PDCD11
Programmed cell death 11.
      
 0.664
NOP9
Pumilio domain-containing protein C14orf21.
      
 0.664
LRRCC1
Leucine rich repeat and coiled-coil centrosomal protein 1.
     
 0.663
TMEM145
Transmembrane protein 145.
      
 0.661
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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