Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ONECUT1One cut domain family member. (465 aa)    
Predicted Functional Partners:
VSX1
Visual system homeobox 1.
      
 0.716
VSX2
Visual system homeobox 2.
      
 0.685
POU4F1
POU domain protein.
   
 
 0.646
NEUROG3
Neurogenin 3.
   
 0.638
OPN1LW
Opsin 1, long wave sensitive.
   
  
 0.608
ATOH7
Atonal bHLH transcription factor 7.
      
 0.595
ARR3
Arrestin 3.
   
  
 0.591
RXRG
Retinoid X receptor gamma.
   
 
 0.590
NR2E3
Nuclear receptor subfamily 2 group E member 3.
    
 
 0.586
RLBP1
Retinaldehyde binding protein 1.
      
 0.583
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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