Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LAMP2Lysosome-associated membrane glycoprotein 2 isoform B. (410 aa)    
Predicted Functional Partners:
LAMP1
Lysosomal associated membrane protein 1.
  
0.995
GORASP2
Golgi reassembly-stacking protein 2 isoform 1.
    
 0.909
GORASP1
Golgi reassembly stacking protein 1.
    
 0.907
EEA1
Early endosome antigen 1.
      
 0.874
TMEM192
Transmembrane protein 192.
    
 0.873
CD63
Tetraspanin.
   
 0.837
LOC709412
Uncharacterized protein; Belongs to the heat shock protein 70 family.
   
 0.832
HSPA8
Heat shock cognate 71 kDa protein isoform 1; Belongs to the heat shock protein 70 family.
   
 0.832
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
   
  
 0.809
TFEB
Transcription factor EB.
   
 
 0.800
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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