Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRDM5Zinc finger protein. (630 aa)    
Predicted Functional Partners:
UROS
Uroporphyrinogen III synthase.
    
 
 0.818
KNG1
Kininogen 1.
    
 
 0.750
EDIL3
EGF like repeats and discoidin domains 3.
    
 
 0.622
BTN1A1
Butyrophilin subfamily 1 member A1.
    
 0.575
PDE6D
GMP_PDE_delta domain-containing protein.
    
 
 0.546
PCOLCE2
Procollagen C-endopeptidase enhancer 2.
      
 0.540
HAPLN1
Hyaluronan and proteoglycan link protein 1.
    
 0.540
SH3RF3
SH3 domain containing ring finger 3.
    
 0.519
ADAM23
ADAM metallopeptidase domain 23.
     
 0.515
GPC6
Glypican 6; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.507
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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