STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMP5Lysosomal associated membrane protein family member 5. (280 aa)    
Predicted Functional Partners:
RORB
Nuclear receptor ROR-beta.
      
 0.746
PVALB
Parvalbumin; Belongs to the parvalbumin family.
     
 0.721
CHODL
Chondrolectin.
     
 0.610
CPNE5
Copine 5.
   
  
 0.607
LRRC10B
Leucine rich repeat containing 10B.
    
 
 0.603
DDN
Dendrin.
      
 0.591
SLC35D3
Solute carrier family 35 member D3.
      
 0.591
ARID5A
AT-rich interaction domain 5A.
      
 0.581
SST
Somatostatin preproprotein.
   
  
 0.576
FREM3
FRAS1 related extracellular matrix 3.
   
  
 0.572
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.