Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LAMP5Lysosomal associated membrane protein family member 5. (280 aa)    
Predicted Functional Partners:
SNCG
Gamma-synuclein; Belongs to the synuclein family.
   
 
 0.670
LHX6
LIM homeobox 6.
      
 0.666
GAD1
Glutamate decarboxylase 1 isoform GAD67.
   
  
 0.660
SLC17A7
Solute carrier family 17 member 7.
   
  
 0.633
ADARB2
Adenosine deaminase RNA specific B2 (inactive).
   
  
 0.625
RORB
Nuclear receptor ROR-beta.
   
  
 0.611
SYT6
Synaptotagmin 6.
   
  
 0.589
SSTR3
Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.572
MEIS2
Meis homeobox 2.
      
 0.570
ARHGAP18
Rho GTPase activating protein 18.
      
 0.555
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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