STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBFOX1RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events. (428 aa)    
Predicted Functional Partners:
ATXN2
Ataxin 2.
    
 
 0.812
QKI
KH domain-containing protein.
   
 
 0.687
RBM3-2
RRM domain-containing protein.
  
 
 
 0.669
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
  
 
 0.666
ELAVL2
ELAV-like protein; Belongs to the RRM elav family.
  
 
 0.655
RBM38
RNA-binding protein 38 isoform a.
  
 
0.654
RBM24
RNA binding motif protein 24.
   
 
 0.631
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.627
SRRM4
Serine/arginine repetitive matrix 4.
   
  
 0.625
HNRNPAB
Heterogeneous nuclear ribonucleoprotein A/B isoform a.
  
 
 
 0.624
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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