STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL11A1Collagen alpha-1(XI) chain isoform A preproprotein. (1806 aa)    
Predicted Functional Partners:
COL5A2
Collagen type V alpha 2 chain.
  
0.861
COL2A1
Collagen type II alpha 1 chain.
  
0.826
COL1A2
Collagen type I alpha 2 chain.
  
0.797
COL1A1
Collagen alpha-1(I) chain preproprotein.
  
0.781
COL3A1
Collagen alpha-1(III) chain preproprotein.
  
 
0.761
COL16A1
Collagen type XVI alpha 1 chain.
  
0.697
COL6A2
Collagen type VI alpha 2 chain.
  
0.593
THBS2
Thrombospondin 2.
   
 0.589
ADAMTS18
ADAM metallopeptidase with thrombospondin type 1 motif 18.
    
 0.577
CDCP2
CUB domain containing protein 2.
    
 0.562
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.