Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HDLBPHigh density lipoprotein binding protein. (1360 aa)    
Predicted Functional Partners:
RACK1
Guanine nucleotide binding protein beta polypeptide 2-like 1.
   
 
 0.813
SND1
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
   
  
 0.763
DNAJC2
DnaJ homolog subfamily C member 2 isoform 1.
   
 
 0.726
EEF1G
Elongation factor 1-gamma.
   
 
 0.726
EEF1G-2
Uncharacterized protein.
   
 
 0.726
APOA1
Truncated apolipoprotein A-I; Participates in the reverse transport of cholesterol from tissues to the liver for excretion by promoting cholesterol efflux from tissues and by acting as a cofactor for the lecithin cholesterol acyltransferase (LCAT). As part of the SPAP complex, activates spermatozoa motility; Belongs to the apolipoprotein A1/A4/E family.
     
 0.722
UBA6
Ubiquitin-like modifier-activating enzyme 6.
    
 
 0.707
NUDCD1
NudC domain-containing protein 1 isoform 1.
    
   0.705
AMD1
S-adenosylmethionine decarboxylase proenzyme.
      
 0.703
DDX6
Putative ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.
   
 0.700
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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