STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM5RNA-binding protein 5. (815 aa)    
Predicted Functional Partners:
RBM39
RNA-binding protein 39 isoform a.
   
 0.849
RBM25
RNA binding motif protein 25.
   
 
 0.847
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.807
SUGP1
Uncharacterized protein.
   
0.785
DHX15
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 0.756
STX12
FHA domain-containing protein.
   
 
 0.752
CWC15
Protein CWC15 homolog.
      
 0.636
KHDRBS2
KH domain-containing, RNA-binding, signal transduction-associated protein 2.
   
 
 0.631
SNRPA
Small nuclear ribonucleoprotein polypeptide A.
   
 
 0.629
DHX9
ATP-dependent RNA helicase A.
   
 0.628
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.