STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM23E3 ubiquitin-protein ligase TRIM23 isoform alpha. (574 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin-60S ribosomal protein L40.
   
 0.963
ITSN2
Intersectin 2.
    
 0.869
ENSMMUP00000071311
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.833
RPS27A-2
Ubiquitin-40S ribosomal protein S27a.
   
 0.828
RPS27A
Uncharacterized protein.
   
 0.826
ENSMMUP00000067421
Ubiquitin-like domain-containing protein.
   
 0.826
ENSMMUP00000070235
Ubiquitin-like domain-containing protein.
   
 0.826
UBB
Uncharacterized protein.
   
 0.817
NME8
NME/NM23 family member 8.
   
 0.763
ITSN1
Intersectin 1.
   
 0.762
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.