STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL9A1Collagen type IX alpha 1 chain. (921 aa)    
Predicted Functional Partners:
COL9A3
Uncharacterized protein.
  
0.952
COL9A2
Collagen type IX alpha 2 chain.
  
 
0.914
LOC106994860
IG domain-containing protein.
     
 0.902
CD44
Phagocytic glycoprotein I.
    
 0.901
ITGA5
Integrin subunit alpha 5; Belongs to the integrin alpha chain family.
   
 0.752
ITGA1
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
    
 0.749
ITGA2
Integrin subunit alpha 2; Belongs to the integrin alpha chain family.
    
 0.739
ITGA11
Integrin subunit alpha 11; Belongs to the integrin alpha chain family.
    
 0.725
ITGA10
Integrin subunit alpha 10; Belongs to the integrin alpha chain family.
    
 0.725
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.725
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.